Transcript Information: S_Transcript_190255.p1


Annotated TAIR IDAT2G39580.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16510540-16516948 | Forward length=1577
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78273533044649
Replicate 21.297811150442
Replicate 30.54243341422355
Condition 2: 8 Hour
Replicate 10.62721736226862
Replicate 21.3159910964545
Replicate 30.62693669426416
Condition 3: 24 Hour
Replicate 11.2849931465055
Replicate 21.333165386844
Replicate 30.98909978059279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_190255.p1 GENE.S_Transcript_190255~~S_Transcript_190255.p1 ORF type:internal len:102 (+),score=27.30 S_Transcript_190255:3-305(+)
CTAAATAATTCTGATGCTAATGGTGTTTATTCAGAATGCAATAATCAAAATTTATCTCCAGATGATGACGATGAGACATTTCCTTTGGATCATGAAGCTGGGCATGCCAATGTGATGTCTCCGCGAGGGGAGGTCAACACTAAAGAAGATGAAATGAACATGGACATTGACTCAAGTACAAAATTTTTAACTGATGGGTCTCGGGATCCTTTAGTTCTTGAAGCATATTTGAGATCCAAATTGTTTTCACGGCTAGGAGTGATTAGTTCTTCAAAGCAAGGTGGCACTTACAGTGATTCAGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_190255.p1 GENE.S_Transcript_190255~~S_Transcript_190255.p1 ORF type:internal len:102 (+),score=27.30 S_Transcript_190255:3-305(+)
LNNSDANGVYSECNNQNLSPDDDDETFPLDHEAGHANVMSPRGEVNTKEDEMNMDIDSSTKFLTDGSRDPLVLEAYLRSKLFSRLGVISSSKQGGTYSDSA

Click here to download the sequence:
Link to NCBI Protein BLAST