Transcript Information: S_Transcript_190260.p1


Annotated TAIR IDAT2G39580.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16510540-16516948 | Forward length=1577
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9914490720203
Replicate 22.4013920606819
Replicate 32.1328334246341
Condition 2: 8 Hour
Replicate 15.802827297179
Replicate 22.43503114446
Replicate 33.4801383844868
Condition 3: 24 Hour
Replicate 13.2693022911093
Replicate 23.5460385459591
Replicate 31.7157853336814


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_190260.p1 GENE.S_Transcript_190260~~S_Transcript_190260.p1 ORF type:internal len:147 (-),score=35.24 S_Transcript_190260:2-439(-)
CGAGGGGAGGTCAACACTAAAGAAGATGAAATGAACATGGACATTGACTCAAGTACAAAATTTTTAACTGATGGGTCTCGGGATCCTTTAGTTCTTGAAGCATATTTGAGGTCCAAATTGTTTTCACGGCTAGGAGTGATTAGTTCTTCAAAGCAAGGTGGCACTTACAGTGATTCAGCAGTAGGAAAAGTTTCTGATGAAGATGTTGCAGGACCACAAACACAGGTAGTCATGGAAAGTGTTTCACCTTCTGATCACGAGGTCTTGAATGACGATCACGGAGATGGCCCCAAGGAACCTGAAGGCAGCATATTTAAGGCACCTTTAAATTCTAAAAACCTACTACATGTTGAAGAGCATTCTCTAAATAATTCACCTATCCCTACTTTAGCTCCTGAAGGCAGCAGCTTTCACATTTTAGATATGACTTCATCACCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_190260.p1 GENE.S_Transcript_190260~~S_Transcript_190260.p1 ORF type:internal len:147 (-),score=35.24 S_Transcript_190260:2-439(-)
RGEVNTKEDEMNMDIDSSTKFLTDGSRDPLVLEAYLRSKLFSRLGVISSSKQGGTYSDSAVGKVSDEDVAGPQTQVVMESVSPSDHEVLNDDHGDGPKEPEGSIFKAPLNSKNLLHVEEHSLNNSPIPTLAPEGSSFHILDMTSSP

Click here to download the sequence:
Link to NCBI Protein BLAST