Transcript Information: S_Transcript_19031.p1


Annotated TAIR IDAT5G52580.2
Annotated Gene NameRabGAP/TBC domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21338052-21342848 | Forward length=690
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.78887938432
Replicate 223.83988354923
Replicate 321.441782832758
Condition 2: 8 Hour
Replicate 132.441817184575
Replicate 235.291761228019
Replicate 333.010408373064
Condition 3: 24 Hour
Replicate 128.48466570658
Replicate 223.283794263846
Replicate 323.918777672937


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19031.p1 GENE.S_Transcript_19031~~S_Transcript_19031.p1 ORF type:complete len:658 (+),score=119.06,RabGAP-TBC|PF00566.14|2.4e-51,DUF3548|PF12068.4|0.097,DUF3548|PF12068.4|1.7e-20 S_Transcript_19031:256-2229(+)
ATGCTCGAAACCGAGGTTCATGATTTATCGGATGATGCCGATTACGCTGCATCTCAGCAACAAGGTTCACAGAGTATAATGCGAAGTGATAGTGGAAGGAGGAGCGAACCTGATGGTGCTGAAATTGTGTATATGAGGGATAATGTGTCGATTCATCCAACTCAGTACATGTCTGAGAGGATTAGTGGTAGATTGAAGTTGATTAAGCAAGGAGATTCTCTTTTCATGACGTGGATTCCCTACAAAGGACAAAACTCAAATGCAAGGCTCTCTGAGAGAGATAGGAATCTGTATACAATAAGGCCGCTGCCATTTACTGATGTGAGGTCCATCCGTAGGCATACTCCTCCACTTGGATGGCAGTATATTATAGTAGTGCTGTCATCAGGACTTGCGTTTCCGCCTCTTTATTTCTACAATGGAGGAGTTAAGGAGTTTCTTGCTACTATCAAGCAACACGTGTTTCTTGTAAGGTCAGCTGATGATGCAAATGTGTTCGTCGTGAATGATTTCCAAGATCCTTTGCAGAAAACTCTCTCTTCTTTGGAGCTTCCTGGGGTTGTCTCTGTTGCTGCACCCTCTAGAAATGGTTCAGTTGCAGTATCCCCTACCAGTGTAAACCAAGAAAAGGTTGATGAAAGTGGCTATGATAGCAATACCAGTTCACAATCTGTTGGAAGGCAAAAGCATAAGGCCAATGATCCTGCTAGGGATATCTCAATTCAGGTGCTGGAGAAATTCTCTCTTGTTACCAAATTTGCCCGGGAAACAACCTCACAGCTGTTCCGTGAAAATAATGGTGATTCTTTTTTCTTAAATGATGGTCGGAAGCTTAGTCATAGCCAATCCGCACCTCACCTTCCACCTAAAGCTCCCACTGCTGACCTGCAAAAAGTTGCTGACGAAGTTCCTGTGCCGGCCGATCCTTTGGAGTTTGATAAATTGGCACTTGTTTGGGGAAAACCACGGCAGCAGCCTCTGACACAAGAAGAGTGGGTTACTTTCTTGGATTTTGAGGGACGAATTGTTGATTGGAAAGCTTTAAGAAAGAGAATATTATATGGTGGTGTTGCCCATGAACTGCGAAAAGAGGTTTGGCCATTCTTGTTGGGATACTATGATCACAATTCGACATATGCGGAACGTGAATACCTTCGATCAGTGAGGAAACAAGATTATGAAATTATAAAGCTCCAATGGCAGAGCATATCTCCAGAGCAAGCAAAAAGATTTACAAAGTTTAGGGAGAGGAAGGGCCTAATCGAGAAGGATGTGGTAAGGACAGACAGATCATTTTCCTTCTTCGATGGAGACGATAATCCCAATATCAATCTCCTGTACGATATATTGCTGACTTATTCATTCTACAATTTTGACCTTGGTTATTGTCAGGGTATGAGTGATTATCTCTCGCCTTTATTGTTCGTCATGGAGGATGATTCTGAAGCATTTTGGTGTTTTGCTGCACTAATGGAACGAGTGGGGCCAAATTTTAATCGTGATCAGAGTGGCATGCATGCACAACTTTTTGCTTTATCAAAGCTGGTGGAACTATCTGACAGTCCATTGCATAACTATTTTAAGCAGAATGACTGCTTGAATTATTTCTTTTGTTTCCGGTGGATTCTTATACAATTCAAAAGGGAACTTCGCTATGAGGAAACACTGCGATTGTGGGAGGTTTTGTGGACGCATCATTTATCGGAGCACCTGCATCTGTATGTATGTGTTGCAATCCTGAAGAGGCACAGGAACAAGATTATTGGGGAGCAAATGGATTTCGACACGCTCTTGAAGTTCATAAATGAGCTAAGTGGTCACATCGACCTCGATGCAACTCTGAGAGATGCCGAGGCACTTTGTATTTGTGCTGGAGAAACTGGAGCAGCCTGCATTCCTCCCGGAACTCCTCCATCTTTGCCTGTGGACAGCGACGGTTTGGTCTCTTCTCAGCTAGAGGATGAAATATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19031.p1 GENE.S_Transcript_19031~~S_Transcript_19031.p1 ORF type:complete len:658 (+),score=119.06,RabGAP-TBC|PF00566.14|2.4e-51,DUF3548|PF12068.4|0.097,DUF3548|PF12068.4|1.7e-20 S_Transcript_19031:256-2229(+)
MLETEVHDLSDDADYAASQQQGSQSIMRSDSGRRSEPDGAEIVYMRDNVSIHPTQYMSERISGRLKLIKQGDSLFMTWIPYKGQNSNARLSERDRNLYTIRPLPFTDVRSIRRHTPPLGWQYIIVVLSSGLAFPPLYFYNGGVKEFLATIKQHVFLVRSADDANVFVVNDFQDPLQKTLSSLELPGVVSVAAPSRNGSVAVSPTSVNQEKVDESGYDSNTSSQSVGRQKHKANDPARDISIQVLEKFSLVTKFARETTSQLFRENNGDSFFLNDGRKLSHSQSAPHLPPKAPTADLQKVADEVPVPADPLEFDKLALVWGKPRQQPLTQEEWVTFLDFEGRIVDWKALRKRILYGGVAHELRKEVWPFLLGYYDHNSTYAEREYLRSVRKQDYEIIKLQWQSISPEQAKRFTKFRERKGLIEKDVVRTDRSFSFFDGDDNPNINLLYDILLTYSFYNFDLGYCQGMSDYLSPLLFVMEDDSEAFWCFAALMERVGPNFNRDQSGMHAQLFALSKLVELSDSPLHNYFKQNDCLNYFFCFRWILIQFKRELRYEETLRLWEVLWTHHLSEHLHLYVCVAILKRHRNKIIGEQMDFDTLLKFINELSGHIDLDATLRDAEALCICAGETGAACIPPGTPPSLPVDSDGLVSSQLEDEIL*

Click here to download the sequence:
Link to NCBI Protein BLAST