Transcript Information: S_Transcript_19053.p1


Annotated TAIR IDAT5G23250.1
Annotated Gene NameSuccinyl-CoA ligase, alpha subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7830460-7832491 | Forward length=341
E-Value4.6E-205
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1102.86198131369
Replicate 299.897205503821
Replicate 395.512820890436
Condition 2: 8 Hour
Replicate 1114.75686578281
Replicate 298.606711159851
Replicate 3110.32982704631
Condition 3: 24 Hour
Replicate 184.881145527969
Replicate 294.775939319271
Replicate 399.852668466002


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19053.p1 GENE.S_Transcript_19053~~S_Transcript_19053.p1 ORF type:complete len:341 (+),score=70.28,CoA_binding|PF02629.15|4.8e-31,Ligase_CoA|PF00549.15|1.6e-22,Succ_CoA_lig|PF13607.2|4.3e-09 S_Transcript_19053:168-1190(+)
ATGGCGAGACAAGCCAGTAGACTCGTAGCAAGTATATCATCCAAGATTTGCTCCCTGAAACCCTCCATTTCGCCGGCTATATCATCATCTCCGGCGAGTCAAACCAGGCTCTTCGGTTCTAATCCATCACCAGCGGTTTTCGTCGATAAGAACACTCGAGTCATTTGCCAAGGTATTACCGGAAAGAACGGTACCTTTCACACCGAACAAGCCATCGAATATGGCACCAAAATGGTTGGTGGTGTAACTCCGGGGAAGGGTGGTTCTGAGCATTTGGGTCTCCCTGTTTTCAACTCAGTTGCTGAAGCAAAAGCTGAAACAAAGGCCAATGCTTCTGTCATATACGTTCCTCCACCCTTTGCTGCCAAAGCAATCTTGGAAGGGTTGGAAGCTGAATTGGATCTTATTGTCTGCATCACTGAAGGAATTCCTCAGCATGATATGGTACGTGTGAAAGCTGCCCTTAACAGGCAATCAAAAACCAGGCTAATTGGTCCCAATTGTCCTGGCATCATTAAACCCGGAGAGTGCAAGATAGGCATCATGCCTGGCTACATCCACAAACCAGGTCGCATAGGAATTGTTTCCCGATCTGGAACATTGACATATGAAGCAGTTTTCCAAACTACTGCTGTTGGCCTTGGGCAATCCACCTGTGTTGGAATTGGTGGGGACCCTTTTAATGGGACAAATTTTGTTGATTGCATTGAGAAGTTCATTGCTGACCCACAAACTGAAGGTATCATACTCATTGGTGAAATTGGGGGTACTGCTGAAGAGGATGCTGCCGCTCTGATTAAGGAAAGTGGTACTGATAAGCCAGTGGTTGCTTTCATTGCTGGGCTAACAGCCCCACCTGGTCGACGCATGGGTCATGCTGGAGCTATTGTCTCAGGCGGAAAAGGCACAGCACAAGACAAGATCAAGACTCTAAGAGAAGTTGGGGCAACAGTAGTTGGATCTCCGGCAAAGATCGGCGCTGCCATGCTTGATGTTTTTAAACAGAGGGGTCTGCTAAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19053.p1 GENE.S_Transcript_19053~~S_Transcript_19053.p1 ORF type:complete len:341 (+),score=70.28,CoA_binding|PF02629.15|4.8e-31,Ligase_CoA|PF00549.15|1.6e-22,Succ_CoA_lig|PF13607.2|4.3e-09 S_Transcript_19053:168-1190(+)
MARQASRLVASISSKICSLKPSISPAISSSPASQTRLFGSNPSPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPGKGGSEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAKAILEGLEAELDLIVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCIEKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTDKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREVGATVVGSPAKIGAAMLDVFKQRGLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST