Transcript Information: S_Transcript_190548.p1


Annotated TAIR IDAT3G47840.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17651912-17654032 | Forward length=706
E-Value4.6E-270
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68826727332363
Replicate 20.53888997482436
Replicate 30.58296004861956
Condition 2: 8 Hour
Replicate 12.3286345748593
Replicate 22.0250380234235
Replicate 31.7763206337485
Condition 3: 24 Hour
Replicate 10.47079490281453
Replicate 20.58613305800898
Replicate 30.83348709959435


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_190548.p1 GENE.S_Transcript_190548~~S_Transcript_190548.p1 ORF type:complete len:696 (+),score=126.45,PPR_2|PF13041.2|0.038,PPR_2|PF13041.2|0.00043,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|3.6e-07,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|6.8e-10,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|5.6e-05,PPR_2|PF13041.2|5.4e+02,PPR_2|PF13041.2|1.6e-12,PPR_2|PF13041.2|0.048,PPR_2|PF13041.2|1.8e+02,PPR|PF01535.16|0.061,PPR|PF01535.16|5.3e-05,PPR|PF01535.16|0.00079,PPR|PF01535.16|0.0043,PPR|PF01535.16|2.1,PPR|PF01535.16|0.00037,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|5.1,PPR|PF01535.16|0.018,PPR|PF01535.16|11,PPR|PF01535.16|4.7e-08,PPR|PF01535.16|20,PPR|PF01535.16|0.00022,PPR|PF01535.16|75,PPR|PF01535.16|0.41,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|6.3e+03,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|18,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|66,PPR_1|PF12854.3|6.5,PPR_1|PF12854.3|6.3e-06,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.00019,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|6.9e+03,PPR_3|PF13812.2|9.1,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|10,PPR_3|PF13812.2|8.9e+03,PPR_3|PF13812.2|1.1e+02,TPR_19|PF14559.2|24,TPR_19|PF14559.2|15,TPR_19|PF14559.2|6.8e+02,TPR_19|PF14559.2|38,TPR_19|PF14559.2|19,TPR_10|PF13374.2|3.9e+03,TPR_10|PF13374.2|2.7e+02,TPR_10|PF13374.2|1.7e+03,TPR_10|PF13374.2|1e+03,TPR_10|PF13374.2|7.2e+02,TPR_10|PF13374.2|0.0045,TPR_12|PF13424.2|6.8e+03,TPR_12|PF13424.2|1.4e+02,TPR_12|PF13424.2|5.3e+03,TPR_12|PF13424.2|1.9e+02,TPR_12|PF13424.2|2.8e+03,TPR_12|PF13424.2|0.0089 S_Transcript_190548:271-2358(+)
ATGCATCGTCTGTTCAGAAGTCTCTATTTCAGGAGACTCTGTACAAGATCAGCTCTTTCTTACGCCGAATATCCATTGAAAGAACCAACCCAGGTCCCCATTTTATTTGGAGCTAATTCCCAGATCAAGGAGTTAGTAAAAGCTGGTAACTTGAAAGATGCACGCCAACTGTTCGATGAAATGCCGCAAAGAGATGAGGTTTCCTGGACCAACCTGATTACTGGGTATGTGGCTGCCTCGGACTATGATGAGGCTTTACATTTGTTTTCCAGGATGTGGGTTGACCCTTGTATCAGAATGGACCCCTTTGCACTCAGTGTAGCTCTGAAAGCCTGTGGGCTTAATAACAGTGTAAATTTTGGACAGTTGTTGCATGGGGTTTGTTTGAAGAATGGACTGGTTAACTCTGTTTTTGTGGGAAGTGCTCTCTTGGATATGTATGCTAAAACAGGTAAGATTTCGGAGAGTTGTCGGGTTTTTGATGAAATGCCAGAGAGGAATGTAGTTTCATGGACTGCCATTATAACAGGACTGGTTAAGGGTGGTTACTGTAAGGAGGGATTGATGTATTTCTCTGACATGTGGTTCGCCCGTTTACCTTGTGATGCATATAGTTTCGCCATTGCGTTGAAGGCGTGTTCTGACTTGTGTGATCTGGTACATGGCATGGAGATTCATACACAAGCAATAAAGAGGGGTTTTGATGCAACCTCTTATGTAGCAAACACTCTTGCTACCATGTACAATAAATGTGGCAAGTTGGATTATGGGATGTGCTTGTTTGGAAGAATGAGGATACCAGATGTGGTTTCATGGACCTCCCTTATTACATCCTATGTTCAGATGGGTATGGGAGACATCGCTGTTCAGCAGTTTTTACGAATGCGAAGCTCAGATGTGAGGCCTAATGAATACACATTTGCAGCTGTTCTTTCTGCTTGTGCCAATCATGGTAAAATCCTATGGGGCAAACAGTTACATGGTCATGTCACGAGGATTGGCTTCGTGGATGCTTTATCTGTAGCAAATTCAGTTGTGGCACTGTATTCAAGATGTGGGCAATTGAAATTGGCATCTGTTGCTTTCAGTGCAATGACTAGGAGAGATATTGTTTCATGGAGCACCATAATGGCTGGTTATTCGCAAGCTGGATTTGGTAAAGAAACCTTTGAGTATTTCTCATGGATGAGGAGGGAAGGACCAAAACCTACTGAGTTTGCACTTGCTAGTGTGTTAAGTGTTTCTGGAGCTATGGCCATTCTTGAGCAGGGAAGGCAAGTACATGCCCATGCTCTGAAAGCTGGATTGGAACATACCTCACTGGTACAAAGTGCGTTGATCACCATGTATTCCAAATGTGGAAGCATAAAACATGCTTCAGATGTGTACAGTTGCACGGGAAATGATGACGTTGTTTGTTGGACTTCCATGATTAATGGATATGCTGAACATGGCCATAGTCAAGAAGCTATAGATTTGTTTGACAGGATGTTGCAAGTTGGTATGAGACCTGATTCTGTGACTTTCATTGGGGTTCTTTCTGCTTGTAGTCATGCAGGACTTGTTGATTTGGGTTATTACTACTTCAATTTTATGAGTAAGATGTTCCAGATTAATCCTTGTAAAGAGCATTATGGCTGCATGATTGATCTCTTATGTAGGGCTGGAAGGTTAACAGAAGCTGAGAGCATGATAGATAGCATGCCCTGTGGACAGGATGATGTTGTATGGTCAACCTTTCTCAGAGCATGTAGAGTTCATGGTGATGTTGAGCATGGGAAGCGTGCTGCAGAGATGATTCTTGAACACAATCCCAACTGTGCTGGAACACTTACTAACCTTGCTAACATATACTCTTTGAAAGGGAAGTGGAGGGAGGCAGCAAACATCAGAAAGATGATGAAATCAAAACAGGTGATAAAAGAGCCTGGATCATCTTGGATCAAGGTCAAGGAGGATGCTTCGACCTTTGTTTCAGGGGATAAATCACATCCGGATAGAGTTCAAATCTACAATGTCCTGGACTTGCTTACATCGGTGATAGATATGTCTGTTCAGGATTTTGATACCCTTCTGCATGATGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_190548.p1 GENE.S_Transcript_190548~~S_Transcript_190548.p1 ORF type:complete len:696 (+),score=126.45,PPR_2|PF13041.2|0.038,PPR_2|PF13041.2|0.00043,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|3.6e-07,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|6.8e-10,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|5.6e-05,PPR_2|PF13041.2|5.4e+02,PPR_2|PF13041.2|1.6e-12,PPR_2|PF13041.2|0.048,PPR_2|PF13041.2|1.8e+02,PPR|PF01535.16|0.061,PPR|PF01535.16|5.3e-05,PPR|PF01535.16|0.00079,PPR|PF01535.16|0.0043,PPR|PF01535.16|2.1,PPR|PF01535.16|0.00037,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|5.1,PPR|PF01535.16|0.018,PPR|PF01535.16|11,PPR|PF01535.16|4.7e-08,PPR|PF01535.16|20,PPR|PF01535.16|0.00022,PPR|PF01535.16|75,PPR|PF01535.16|0.41,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|6.3e+03,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|18,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|66,PPR_1|PF12854.3|6.5,PPR_1|PF12854.3|6.3e-06,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.00019,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|6.9e+03,PPR_3|PF13812.2|9.1,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|10,PPR_3|PF13812.2|8.9e+03,PPR_3|PF13812.2|1.1e+02,TPR_19|PF14559.2|24,TPR_19|PF14559.2|15,TPR_19|PF14559.2|6.8e+02,TPR_19|PF14559.2|38,TPR_19|PF14559.2|19,TPR_10|PF13374.2|3.9e+03,TPR_10|PF13374.2|2.7e+02,TPR_10|PF13374.2|1.7e+03,TPR_10|PF13374.2|1e+03,TPR_10|PF13374.2|7.2e+02,TPR_10|PF13374.2|0.0045,TPR_12|PF13424.2|6.8e+03,TPR_12|PF13424.2|1.4e+02,TPR_12|PF13424.2|5.3e+03,TPR_12|PF13424.2|1.9e+02,TPR_12|PF13424.2|2.8e+03,TPR_12|PF13424.2|0.0089 S_Transcript_190548:271-2358(+)
MHRLFRSLYFRRLCTRSALSYAEYPLKEPTQVPILFGANSQIKELVKAGNLKDARQLFDEMPQRDEVSWTNLITGYVAASDYDEALHLFSRMWVDPCIRMDPFALSVALKACGLNNSVNFGQLLHGVCLKNGLVNSVFVGSALLDMYAKTGKISESCRVFDEMPERNVVSWTAIITGLVKGGYCKEGLMYFSDMWFARLPCDAYSFAIALKACSDLCDLVHGMEIHTQAIKRGFDATSYVANTLATMYNKCGKLDYGMCLFGRMRIPDVVSWTSLITSYVQMGMGDIAVQQFLRMRSSDVRPNEYTFAAVLSACANHGKILWGKQLHGHVTRIGFVDALSVANSVVALYSRCGQLKLASVAFSAMTRRDIVSWSTIMAGYSQAGFGKETFEYFSWMRREGPKPTEFALASVLSVSGAMAILEQGRQVHAHALKAGLEHTSLVQSALITMYSKCGSIKHASDVYSCTGNDDVVCWTSMINGYAEHGHSQEAIDLFDRMLQVGMRPDSVTFIGVLSACSHAGLVDLGYYYFNFMSKMFQINPCKEHYGCMIDLLCRAGRLTEAESMIDSMPCGQDDVVWSTFLRACRVHGDVEHGKRAAEMILEHNPNCAGTLTNLANIYSLKGKWREAANIRKMMKSKQVIKEPGSSWIKVKEDASTFVSGDKSHPDRVQIYNVLDLLTSVIDMSVQDFDTLLHDA*

Click here to download the sequence:
Link to NCBI Protein BLAST