Transcript Information: S_Transcript_190629.p1


Annotated TAIR IDAT4G37880.1
Annotated Gene NameLisH/CRA/RING-U-box domains-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17810183-17811349 | Forward length=388
E-Value2.2E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.201060523077
Replicate 218.747655375298
Replicate 320.688354207769
Condition 2: 8 Hour
Replicate 122.982804072351
Replicate 222.429806796824
Replicate 324.739636598528
Condition 3: 24 Hour
Replicate 123.655858287742
Replicate 221.489520821096
Replicate 321.170835200149


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_190629.p1 GENE.S_Transcript_190629~~S_Transcript_190629.p1 ORF type:complete len:386 (+),score=62.03,CLTH|PF10607.5|8.3e+02,CLTH|PF10607.5|1.3e-35,zf-RING_UBOX|PF13445.2|6.4e+03,zf-RING_UBOX|PF13445.2|2.9e-17,zf-RING_5|PF14634.2|2.9e+03,zf-RING_5|PF14634.2|3.8e-07 S_Transcript_190629:192-1349(+)
ATGGAGCTCAAGACTGTGAAAGATGCATTTGACCATGTTACTAAGAAGCAAAAAGTGTGTTCTTCCAAATGCCATGAAGCAATAGAACAGATAGGGCTAGAAATTGAGCAGGCTTTAGTGAAATTACAATCAACTGATCCTGTCAAATCCTGCCTGGATCATAAGACCATACTTGCTGATCTCAAGACAAAGTTAAAGGAGATTGCTCCACTCAGCCAGCTAGAATCCAGTCAAAAGGAGTTGAACGTAGCGTTGAGCAAGTACCCAAAGCAGCTTGAAAAATCTTTCAACCCAGATATATCAAAAGCTTACAAAAATATTGATTTTGATGTCCACACAATCAATCAGATCATAGCCAGCCATCTATACAGGAAAGGCCTATTTGATTTGGGAGACTGCTTTGCAAATGAGGCTGGAGAGCAAGAAGCTGCTGCCATGAAGTCACCCTTCATCGAGATGTACCATATCCTTCAAGCCATGAAGTCACATAACCTGGAGCCAGCCCTGAATTGGGCCACTGTTAACTGCGAGAAACTCAGGCAAACTGGATCAGATCTTGAGCTCAAACTTCACAGGTTACAATATGTAGAGATTTTGCAGAAACGCGGTAAAGAAGATGCTCTGAAATACGCAAGGTCCTACCTTGCTCCTTTTGCTTCCAGTCATATGGCGGAAATCCAGAAGCTGATGGCATGTCTGATATGGGTCGATAAACTTCCTTGCTCCCCGTATGCTGATTTACTCTCTCAGAGCAACTGGGAAAAGTTGGCCGAGGAATTTACTAGGCATTTCTGCAATCTTCTAGGGCAATCTTTCGAGAGCCCATTGAGCGTGACTGTAGCAGCAGGAATCCAGGGCCTGCCTACCCTTCTCAAGCTGATGAACTTGGTAATGGGGAAGAAACAAGAATGGCAAACTATGAAGCAGCTCCCAGTACCGATTGATTTGGATAAAGAGTTTCAGTTTCACACGATTTTCGTATGCCCTGTTAGCAGGGACCAGGCTACGGAAGAGAACCCGCCAATGCTGATGTCATGTGGGCATGTCCTTTGCAAGCAGTCCATTATGAAGCTTTCCAAGAGCAGTACAAAGTCTTTCAAGTGCCCTTACTGCCCAACGGAAATCGAGGCTTCTCAGTGTAGACAGTTAGTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_190629.p1 GENE.S_Transcript_190629~~S_Transcript_190629.p1 ORF type:complete len:386 (+),score=62.03,CLTH|PF10607.5|8.3e+02,CLTH|PF10607.5|1.3e-35,zf-RING_UBOX|PF13445.2|6.4e+03,zf-RING_UBOX|PF13445.2|2.9e-17,zf-RING_5|PF14634.2|2.9e+03,zf-RING_5|PF14634.2|3.8e-07 S_Transcript_190629:192-1349(+)
MELKTVKDAFDHVTKKQKVCSSKCHEAIEQIGLEIEQALVKLQSTDPVKSCLDHKTILADLKTKLKEIAPLSQLESSQKELNVALSKYPKQLEKSFNPDISKAYKNIDFDVHTINQIIASHLYRKGLFDLGDCFANEAGEQEAAAMKSPFIEMYHILQAMKSHNLEPALNWATVNCEKLRQTGSDLELKLHRLQYVEILQKRGKEDALKYARSYLAPFASSHMAEIQKLMACLIWVDKLPCSPYADLLSQSNWEKLAEEFTRHFCNLLGQSFESPLSVTVAAGIQGLPTLLKLMNLVMGKKQEWQTMKQLPVPIDLDKEFQFHTIFVCPVSRDQATEENPPMLMSCGHVLCKQSIMKLSKSSTKSFKCPYCPTEIEASQCRQLVF*

Click here to download the sequence:
Link to NCBI Protein BLAST