Transcript Information: S_Transcript_190637.p1


Annotated TAIR IDAT4G37880.1
Annotated Gene NameLisH/CRA/RING-U-box domains-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17810183-17811349 | Forward length=388
E-Value1.6E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9636384818354
Replicate 20
Replicate 30.1961993200383
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 21.2055218923589
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_190637.p1 GENE.S_Transcript_190637~~S_Transcript_190637.p1 ORF type:5prime_partial len:94 (-),score=7.61,zf-RING_UBOX|PF13445.2|2.4e-18,zf-RING_5|PF14634.2|2.9e-08,zf-C3HC4_4|PF15227.2|9.7e-06,zf-RING_2|PF13639.2|7.8e-06,zf-C3HC4_3|PF13920.2|1.5e-05 S_Transcript_190637:98-379(-)
TCCAAATCAATCGGTACTGGGAAGAAACAAGAATGGCAAACTATGAAGCAGCTCCCAGTACCGATTGATTTGGATAAAGAGTTTCAGTTTCACACGATTTTCGTATGCCCTGTTAGCAGGGACCAGGCTACGGAAGAGAACCCGCCAATGCTGATGTCATGTGGGCATGTCCTTTGCAAGCAGTCCATTATGAAGCTTTCCAAGAGCAGTACAAAGTCTTTCAAGTGCCCTTACTGCCCAACGGAAATCGAGGCTTCTCAGTGTAGACAGTTAGTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_190637.p1 GENE.S_Transcript_190637~~S_Transcript_190637.p1 ORF type:5prime_partial len:94 (-),score=7.61,zf-RING_UBOX|PF13445.2|2.4e-18,zf-RING_5|PF14634.2|2.9e-08,zf-C3HC4_4|PF15227.2|9.7e-06,zf-RING_2|PF13639.2|7.8e-06,zf-C3HC4_3|PF13920.2|1.5e-05 S_Transcript_190637:98-379(-)
SKSIGTGKKQEWQTMKQLPVPIDLDKEFQFHTIFVCPVSRDQATEENPPMLMSCGHVLCKQSIMKLSKSSTKSFKCPYCPTEIEASQCRQLVF*

Click here to download the sequence:
Link to NCBI Protein BLAST