Transcript Information: S_Transcript_190646.p1


Annotated TAIR IDAT3G17640.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6032393-6033583 | Forward length=396
E-Value4.7E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4248799057933
Replicate 22.6531202632454
Replicate 32.8403369917782
Condition 2: 8 Hour
Replicate 12.6994164958396
Replicate 22.548691617184
Replicate 32.7881488428457
Condition 3: 24 Hour
Replicate 13.2721238983801
Replicate 23.7773019293912
Replicate 33.6715634260612


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_190646.p1 GENE.S_Transcript_190646~~S_Transcript_190646.p1 ORF type:complete len:474 (+),score=-0.93,LRR_8|PF13855.2|9.2e+02,LRR_8|PF13855.2|2e+02,LRR_8|PF13855.2|3.4e-09,LRR_8|PF13855.2|0.0017,LRR_8|PF13855.2|3.9,LRR_8|PF13855.2|1.5e+02,LRR_8|PF13855.2|4.9,LRR_8|PF13855.2|32,LRR_8|PF13855.2|1.8e+02,LRRNT_2|PF08263.8|5.9e-10,LRR_1|PF00560.29|3.7e+03,LRR_1|PF00560.29|3.6,LRR_1|PF00560.29|33,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|4.2e+02,LRR_1|PF00560.29|7.9,LRR_1|PF00560.29|7.9e+02,LRR_1|PF00560.29|75,LRR_1|PF00560.29|55,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|1.1e+03,LRR_4|PF12799.3|1.4e+03,LRR_4|PF12799.3|8.7,LRR_4|PF12799.3|0.033,LRR_4|PF12799.3|0.0036,LRR_4|PF12799.3|0.38,LRR_4|PF12799.3|4.2,LRR_4|PF12799.3|0.08,LRR_4|PF12799.3|27,LRR_4|PF12799.3|1.6e+02,LRR_4|PF12799.3|3.7e+03 S_Transcript_190646:76-1497(+)
ATGCTCTATCTTCTTCTTCTTATACCCTTCCCTCATTGGCCCCCCCTCCCAAACACTCCCTTACCCCAAAATCAGAGTCTAGAGAGAGAAATACACACTCTCTCTCTCTCTCTCATTATTTCTCTATCTAATATGGCTTCTTTAAATTTTATTTCCTTCCAGAATATCATGTTTGTACAACTAATATATTTGCTCTCTGTTTTTCACCCTTCATTTCAACAACAAACATATAATGCTAAGCTTAGCACTGCTGATCTTGAAGCCCTTCTTGACATCAAGAACAGCCTCACTGACCTCCCTGGCTCCTCCTTCTTCTCCACCTGGAACTCCTCCGTACCTGATCCCTGCTCCTCCTTCGCCGGCGTCTCGTGCTCCGGCGAGGATGAGGCCGGGGCGCTCAGGGTCACCTCGCTCTCGCTCGGGTCGGGCCTGTCGGGTTCGCTTGGGCTGGCCGGGTCGCTCCCGGACTCGCTCGCCGAGCTCACGGGACTGACCCAGCTCACCCTCAGCCCGGGCCTCGTCACGGGCCCGATCCCAGCCCGGCTCGGTACCCAGCTCGCCAGGCTCCGGGTCCTCTCCCTGGCCCACAACCGCCTCACGGGGCCGGTCCCCGCGACGCTGGCCGGCCTTGCGGGGCTCCACACCCTCGACCTCGGGTTCAACCGGCTCTCAGGCCCGGTCCCTCCGGGCCTGCTCGGCGGGATGCCGGGCCTCAAGGTTCTCATCCTCGCTGGGAACCGGCTCATTGGGCCGATTCCCGAGCCGACCACTCAGCAGCAGCAGCTACTCCACCTAGACCTCAAGTCGAACCTCCTAGTGGGCCCCATACCATCCTCATTGCCGTTGTCCCTCCGCTACCTCTCGTTATCCGAGAACCAAATGTGGGGCCCCCTCAACGGCCTTGAGTCACTATCAGAGTTAGTTTACCTCGATCTCAGCGTGAACTCATTTAGTGGGTCCCTCCCTCCATCACTCCTACACTCTACTCTCTCCACTCTGCTCCTCAATCGTAACAATCTATCCGGTGAAATCGTCGTACCACAAGTACTGGACGATAAAATTATACCGTACCTCCAGGGGTCAGTTCTCGACCTCAGCCACAATGCGTTCTCGGGGGAGATCCCTGAGGCGCTGGCTGGGGCCGAGAGTATTTACCTCAACAACAACAAGTTCATGGGGTCCGTAGCCGAAGGGTATGTGACAGGGCTTAGGGAAGGAAGGACTAAGACTCTGTATCTTCAACACAACTTCTTGGATGCATTTCCTAAGAATTTTGATCAAGGAATGTTGCCTGATGAGGCTGAGATTTGCTTGGCTTACAATTGCATGGTCCCACCCGCCGGCCTCGCCACGTGCCCCACCAGCGCCGGTAACCAGCTCTCGCGTCCGGCCAGGCAATGCTCGGTGTTCCATAGCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_190646.p1 GENE.S_Transcript_190646~~S_Transcript_190646.p1 ORF type:complete len:474 (+),score=-0.93,LRR_8|PF13855.2|9.2e+02,LRR_8|PF13855.2|2e+02,LRR_8|PF13855.2|3.4e-09,LRR_8|PF13855.2|0.0017,LRR_8|PF13855.2|3.9,LRR_8|PF13855.2|1.5e+02,LRR_8|PF13855.2|4.9,LRR_8|PF13855.2|32,LRR_8|PF13855.2|1.8e+02,LRRNT_2|PF08263.8|5.9e-10,LRR_1|PF00560.29|3.7e+03,LRR_1|PF00560.29|3.6,LRR_1|PF00560.29|33,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|4.2e+02,LRR_1|PF00560.29|7.9,LRR_1|PF00560.29|7.9e+02,LRR_1|PF00560.29|75,LRR_1|PF00560.29|55,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|1.1e+03,LRR_4|PF12799.3|1.4e+03,LRR_4|PF12799.3|8.7,LRR_4|PF12799.3|0.033,LRR_4|PF12799.3|0.0036,LRR_4|PF12799.3|0.38,LRR_4|PF12799.3|4.2,LRR_4|PF12799.3|0.08,LRR_4|PF12799.3|27,LRR_4|PF12799.3|1.6e+02,LRR_4|PF12799.3|3.7e+03 S_Transcript_190646:76-1497(+)
MLYLLLLIPFPHWPPLPNTPLPQNQSLEREIHTLSLSLIISLSNMASLNFISFQNIMFVQLIYLLSVFHPSFQQQTYNAKLSTADLEALLDIKNSLTDLPGSSFFSTWNSSVPDPCSSFAGVSCSGEDEAGALRVTSLSLGSGLSGSLGLAGSLPDSLAELTGLTQLTLSPGLVTGPIPARLGTQLARLRVLSLAHNRLTGPVPATLAGLAGLHTLDLGFNRLSGPVPPGLLGGMPGLKVLILAGNRLIGPIPEPTTQQQQLLHLDLKSNLLVGPIPSSLPLSLRYLSLSENQMWGPLNGLESLSELVYLDLSVNSFSGSLPPSLLHSTLSTLLLNRNNLSGEIVVPQVLDDKIIPYLQGSVLDLSHNAFSGEIPEALAGAESIYLNNNKFMGSVAEGYVTGLREGRTKTLYLQHNFLDAFPKNFDQGMLPDEAEICLAYNCMVPPAGLATCPTSAGNQLSRPARQCSVFHSN*

Click here to download the sequence:
Link to NCBI Protein BLAST