Transcript Information: S_Transcript_190911.p1


Annotated TAIR IDAT5G27660.1
Annotated Gene NameTrypsin family protein with PDZ domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9789835-9792235 | Reverse length=428
E-Value1.2E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.822270524492
Replicate 25.5539123828386
Replicate 35.451894269517
Condition 2: 8 Hour
Replicate 111.721577125814
Replicate 28.8350718646495
Replicate 311.273277370764
Condition 3: 24 Hour
Replicate 14.0360061876386
Replicate 24.030285199489
Replicate 35.0094591659122


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_190911.p1 GENE.S_Transcript_190911~~S_Transcript_190911.p1 ORF type:complete len:433 (+),score=92.79,Trypsin_2|PF13365.2|2.2e-33,Trypsin|PF00089.22|2.7e-16,PDZ_2|PF13180.2|2.3e+03,PDZ_2|PF13180.2|5.3e-10 S_Transcript_190911:228-1526(+)
ATGGCGCGTTTGCTGAAGAGATTGTCAGCCATTGACAAGAAATTGCTGCTGCGTGGAGTCGCGGTTGCAACAGCGGGTTCTGGGCTTTTGTATGCAACAACAAATGGGCCTGCTGGCCCAACTTCCAGACTACATGTGTCAATATCATTGTCGATGAAAGGTGAATCATCACACTTGCCGTGGCGAGTCCCGCTGTTGTCTGTAGACCCTATAACACCTGGAAATAAAGATAATTCCTATATGCTGCATTCCTCTAGAGTTGCACCTGGTCCAGCTGCTGATGCAAGTAACCAATCATCTGCTGATGGACCAAAAGATTGCTCGCATTGTTTTGGTCGAGATACCATAGCCAATGCAGCTGCCAAGGTTAGCCCAGCTGTAGTGAATCTGTCTGTACCACAGGGTTTCTATGGATTGACTATGGGGAAGAGTATAGGTTCGGGAACTATTATTGATCCAGATGGTACTATTTTGACCTGTGCCCATGTAGTTGTTGACTTTCAGGGTATGAGAGCTTCATCTAAAGGGAAGGTTGAGGTGACATTGCAAGATGGACGGACATTTGAGGGTACAGTACTAAATGCTGATTCACATTCTGATATTGCTATTGTAAAGATAAAATCAAAACTACCACTACCTGCTGCGAAACTTGGCTCATCAAGTAAACTTCGTCCTGGGGAATGGGTAATAGCATTGGGCTGCCCGCTTTCCCTGCAAAATACTGTGACAGCTGGAATTGTAAGCTGTGTTGACCGAAAAAGTAGTGATCTGGGTCTTGGTGGTATGAGAAGGGAATATTTGCAGACTGATTGTGCCATTAATGCGGGAAATTCTGGAGGTCCTCTTGTTGACATGGATGGGGAGGTGGTTGGTGTTAATAACATGAAAGTGTTGATCGCTGATGGATTAAGCTTTGCTGTACCAATTGATTCAATCTCCAAAATTATCGAACATTTCAAGAGGAGAGGGAGAGTTGTTCGCCCTTGGCTGGGACTCAAAATGATTGATCTCAATGAATTGATACTAGCACAGCTTAAAGAGAGGGATCCAACATTTCCAAATGTTGACAGAGGTGTTCTTGTCCCTATGGTTACGCCAGGCTCCCCCGCAGATTGTGCTGGATTCCGTCCAGGAGATGTCGTCATTGAATTTGATGGAAAACCAGTTGGAAGCATAAAGGAGATCACCGACATAATGGATGACAAAGTAGGGAAGCCATTGAAGGTGGTTGTGAAGAGGGCTAACAATGCTGTGTTACACCTAACTGTGATCCCGGAGGAAGCAAATCCAGATATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_190911.p1 GENE.S_Transcript_190911~~S_Transcript_190911.p1 ORF type:complete len:433 (+),score=92.79,Trypsin_2|PF13365.2|2.2e-33,Trypsin|PF00089.22|2.7e-16,PDZ_2|PF13180.2|2.3e+03,PDZ_2|PF13180.2|5.3e-10 S_Transcript_190911:228-1526(+)
MARLLKRLSAIDKKLLLRGVAVATAGSGLLYATTNGPAGPTSRLHVSISLSMKGESSHLPWRVPLLSVDPITPGNKDNSYMLHSSRVAPGPAADASNQSSADGPKDCSHCFGRDTIANAAAKVSPAVVNLSVPQGFYGLTMGKSIGSGTIIDPDGTILTCAHVVVDFQGMRASSKGKVEVTLQDGRTFEGTVLNADSHSDIAIVKIKSKLPLPAAKLGSSSKLRPGEWVIALGCPLSLQNTVTAGIVSCVDRKSSDLGLGGMRREYLQTDCAINAGNSGGPLVDMDGEVVGVNNMKVLIADGLSFAVPIDSISKIIEHFKRRGRVVRPWLGLKMIDLNELILAQLKERDPTFPNVDRGVLVPMVTPGSPADCAGFRPGDVVIEFDGKPVGSIKEITDIMDDKVGKPLKVVVKRANNAVLHLTVIPEEANPDM*

Click here to download the sequence:
Link to NCBI Protein BLAST