Transcript Information: S_Transcript_190991.p1


Annotated TAIR IDAT5G55960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22662726-22664762 | Forward length=648
E-Value1.8E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0505132066519
Replicate 21.0160495190961
Replicate 30.24266758004738
Condition 2: 8 Hour
Replicate 10.28059724101491
Replicate 20.29436642947009
Replicate 30.28047167901291
Condition 3: 24 Hour
Replicate 10.14371633875391
Replicate 21.1928321882288
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_190991.p1 GENE.S_Transcript_190991~~S_Transcript_190991.p1 ORF type:internal len:152 (+),score=22.01,UPF0118|PF01594.12|1.5e-06 S_Transcript_190991:2-454(+)
AAAAACCGATGTGTTCAGGCTCTCAACAATGCAATCTCAGGTGTGCTATTAGCCACAGCAGAGATAGCATTTTTTCAGTGCTCTTTCACTTGGCTTCTTTGCAGGCTTTTCTCTATACACTTTGTGTATATGTCAACTATGCTTGCATTTATAAGCCCTTTGCTCCCTATTTTTCCATCTTGGCTACCAACAATTCCAGGAGCTTTGCAATTAGTGCTTGATGGGAGATATGTTTTGGCAATCAGCTTTTGTGTAACTCATTTTGTTGTGATGGATTATGGGGCCTCTGAAATTGCTGAATATGTGCCTGGTTATAGCACTTATCTCACTGGGGTTAGCATCCTTGGAGGAATGACTTTGTTTCCCTCAGCATTGGAGGGAGCTATAATGGGACCTCTGATAACCACTGTTGTGATCGCCCTTAAGGACTTGTATGCTGAATTTGTGTTGAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_190991.p1 GENE.S_Transcript_190991~~S_Transcript_190991.p1 ORF type:internal len:152 (+),score=22.01,UPF0118|PF01594.12|1.5e-06 S_Transcript_190991:2-454(+)
KNRCVQALNNAISGVLLATAEIAFFQCSFTWLLCRLFSIHFVYMSTMLAFISPLLPIFPSWLPTIPGALQLVLDGRYVLAISFCVTHFVVMDYGASEIAEYVPGYSTYLTGVSILGGMTLFPSALEGAIMGPLITTVVIALKDLYAEFVLN

Click here to download the sequence:
Link to NCBI Protein BLAST