Transcript Information: S_Transcript_190992.p1


Annotated TAIR IDAT5G55960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22662726-22664762 | Forward length=648
E-Value5.2E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.36963897580893
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 31.02054514934


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_190992.p1 GENE.S_Transcript_190992~~S_Transcript_190992.p1 ORF type:5prime_partial len:173 (+),score=17.83 S_Transcript_190992:2-520(+)
AAAAACCGATGTGTTCAGGCTCTCAACAATGCAATCTCAGGTGTGCTATTAGCCACAGCAGAGATAGCATTTTTTCAGTGCTCTTTCACTTGGCTTCTTTGCAGGCTTTTCTCTATACACTTTGTGTATATGTCAACTATGCTTGCATTTATAAGCCCTTTGCTCCCTATTTTTCCATCTTGGCTACCAACAATTCCAGGAGCTTTGCAATTAGTGCTTGATGGGAGATATGTTTTGGCAATCAGCTTTTGTGTAACTCATTTTGTTGTGATGGATTATGGGGCCTCTGAAATTGCTGAATATGTGCCTGGTTATAGCACTTATCTCACTGGGGTTAGCATCCTTGGAGGAATGACTTTGTTTCCCTCAGCATTGGAGGTAACTTTTACTACATTCCCTTTCATTGGTTGCTTTCTAATAAGCTTTATGCATCTTTCTTTCCTTACTTGTTGCTTGTTTATGCATGTAAGTGTTGTCTTGAATTTGATTATTCATGTAGGATATCATGGATTATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_190992.p1 GENE.S_Transcript_190992~~S_Transcript_190992.p1 ORF type:5prime_partial len:173 (+),score=17.83 S_Transcript_190992:2-520(+)
KNRCVQALNNAISGVLLATAEIAFFQCSFTWLLCRLFSIHFVYMSTMLAFISPLLPIFPSWLPTIPGALQLVLDGRYVLAISFCVTHFVVMDYGASEIAEYVPGYSTYLTGVSILGGMTLFPSALEVTFTTFPFIGCFLISFMHLSFLTCCLFMHVSVVLNLIIHVGYHGLS*

Click here to download the sequence:
Link to NCBI Protein BLAST