Transcript Information: S_Transcript_191010.p1


Annotated TAIR IDAT5G13230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4222514-4224982 | Forward length=822
E-Value4E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35484001646907
Replicate 20.23533642194682
Replicate 30
Condition 2: 8 Hour
Replicate 11.2510895652718
Replicate 20.35794957823563
Replicate 30.73894938363935
Condition 3: 24 Hour
Replicate 10.23301209056634
Replicate 20.12087366174052
Replicate 30.20177635524093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_191010.p1 GENE.S_Transcript_191010~~S_Transcript_191010.p1 ORF type:complete len:375 (+),score=72.88,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|0.99,PPR_2|PF13041.2|8.2e-08,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|5.1e-12,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.017,PPR|PF01535.16|0.0031,PPR|PF01535.16|9.9e+03,PPR|PF01535.16|0.0068,PPR|PF01535.16|7.3e-08,PPR|PF01535.16|1.9e+02,PPR_1|PF12854.3|6.4,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|23,PPR_1|PF12854.3|36,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|3.2,PPR_1|PF12854.3|0.0023,PPR_1|PF12854.3|18,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|7.2e+03,PPR_3|PF13812.2|0.033,PPR_3|PF13812.2|35,PPR_3|PF13812.2|5.2e+02,PPR_3|PF13812.2|64,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|2.8e+02 S_Transcript_191010:147-1271(+)
ATGTCTGAACCCGCCGTTTTATTGCCAAAGCTTTACTTGGGTAAGTTCAAAATGGGTCGGATTCTCAGCTCAAGCACCCGAACTGGGCCCAGAGGTCGCAGCTCCTCCTCCTCCTCCTGGGATGTCAACATATTTAGAGTTCGATTCTCATGCATATGGAAGTGTTCTTCAGGATTGTACTCTGCATCACCAACCCATCAAAGGTCAAGCCCTTCATTGTCAAGTTCTCAAGAGAGGGATGTATTTGATGCCATTTTGATCAAAGACATGGTTTGTTGGAGTGGAATGGTGGCTGGCTATACTGAGAATAATTGCTTCAGAGAGGCATTAGAGCTTTACTCAGATATGAGGATGTTCGGTTTCAAGCCCAACAATTTTACTTTTGCTAGTGGCTTGAAGGCTTGTCTTGGGTTGGGAGATGTTCATCTGGCCCTTTGTATTCATGGGTGTATTATAAAAACTAATTATGAGAAGGGCAACTATGTTGCTATTTCCCTCCTTGATTTGTATACCAGTTGTGGAGATCCTAGGGATGCTCAGCGAGTGTTTGAGGACATGCCAAAAGAAGATGTGGTTTCTTGGAGCTTCATGATCGCTCGCTGTGCACAGACTGACCAGTGTGACGTGGCTGTCGATTTGTTTCAGCGAATGAGGCAAGCTTTTGTCATGCCTAATGAGTTTACTTTAGCAAGCATGTTGCAGGCATGTGCGAGTATGACTAGTTTTGATATTGGGAAGCAAATACATTCCCTTGTCATAAAGGCTGGCCTTGCTTCTAATGTGTTTGTCTCTAATGCCCTAATTGATGTTTATGCAAAGTGTGAAAGGATGGAGGACTCAGTGTTTTTGTTTGAGGAATCAAAAGATAAAAATGATGTGACCTGGAACACTATGATTGTTGGCTATGGGCAATTAGGGGATGGCGAGAAAGCATTTTTGATGTTCAAGAATATGCTTGAGCACAAGCTGCTTCCAACTGAAGTAACATATTCAAGTATACTCCGTGCATGTGCTTGTTTAGCAGCAGTTGATCCTGGAATGCAGATCCATGCCTTTACTGTTAAAACCAAGTTTGACAAAGATAGTGTGCTTATGCCATGCATGGCCTTGGAAGGGAGGCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_191010.p1 GENE.S_Transcript_191010~~S_Transcript_191010.p1 ORF type:complete len:375 (+),score=72.88,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|0.99,PPR_2|PF13041.2|8.2e-08,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|5.1e-12,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.017,PPR|PF01535.16|0.0031,PPR|PF01535.16|9.9e+03,PPR|PF01535.16|0.0068,PPR|PF01535.16|7.3e-08,PPR|PF01535.16|1.9e+02,PPR_1|PF12854.3|6.4,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|23,PPR_1|PF12854.3|36,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|3.2,PPR_1|PF12854.3|0.0023,PPR_1|PF12854.3|18,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|7.2e+03,PPR_3|PF13812.2|0.033,PPR_3|PF13812.2|35,PPR_3|PF13812.2|5.2e+02,PPR_3|PF13812.2|64,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|2.8e+02 S_Transcript_191010:147-1271(+)
MSEPAVLLPKLYLGKFKMGRILSSSTRTGPRGRSSSSSSWDVNIFRVRFSCIWKCSSGLYSASPTHQRSSPSLSSSQERDVFDAILIKDMVCWSGMVAGYTENNCFREALELYSDMRMFGFKPNNFTFASGLKACLGLGDVHLALCIHGCIIKTNYEKGNYVAISLLDLYTSCGDPRDAQRVFEDMPKEDVVSWSFMIARCAQTDQCDVAVDLFQRMRQAFVMPNEFTLASMLQACASMTSFDIGKQIHSLVIKAGLASNVFVSNALIDVYAKCERMEDSVFLFEESKDKNDVTWNTMIVGYGQLGDGEKAFLMFKNMLEHKLLPTEVTYSSILRACACLAAVDPGMQIHAFTVKTKFDKDSVLMPCMALEGRH*

Click here to download the sequence:
Link to NCBI Protein BLAST