Transcript Information: S_Transcript_191262.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.49028421238922
Replicate 30.61475786945335
Condition 2: 8 Hour
Replicate 12.6064365943162
Replicate 22.4857609599696
Replicate 31.1842137558323
Condition 3: 24 Hour
Replicate 11.4563255660396
Replicate 21.5109207717565
Replicate 30.84073481350387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_191262.p2 GENE.S_Transcript_191262~~S_Transcript_191262.p2 ORF type:complete len:90 (-),score=18.60,gag_pre-integrs|PF13976.2|4.7e-15 S_Transcript_191262:36-305(-)
ATGGGCACATTATTCACTACTGTAGGGTGTGAGAACATAATTGCCTCAACCAAAGGGGATGAGGTCAAGCTTTGGCACAATAGGCTTGGCCACATAAGTGAGAAAGGGATGAAGATTATGGCTTCGAGGGGCAAACTTTCCAATGCGAAATCAGTCGATCTTGAGGTTTGTGAGAGTTGTGTGATGGGAAGGCAGAGAAGAATGATTTTCACAAAGAATAGGAGAGAGTTGAGAAAGGAGAAGCTGGAGTTAGTGCACACTGATGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_191262.p2 GENE.S_Transcript_191262~~S_Transcript_191262.p2 ORF type:complete len:90 (-),score=18.60,gag_pre-integrs|PF13976.2|4.7e-15 S_Transcript_191262:36-305(-)
MGTLFTTVGCENIIASTKGDEVKLWHNRLGHISEKGMKIMASRGKLSNAKSVDLEVCESCVMGRQRRMIFTKNRRELRKEKLELVHTDV*

Click here to download the sequence:
Link to NCBI Protein BLAST