Transcript Information: S_Transcript_191334.p1


Annotated TAIR IDAT1G31790.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11394744-11395973 | Reverse length=409
E-Value3E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0170573720451
Replicate 20.77290027112313
Replicate 30.64608311120894
Condition 2: 8 Hour
Replicate 13.1920170219912
Replicate 22.2799336193352
Replicate 32.4438551394246
Condition 3: 24 Hour
Replicate 10.90440600438766
Replicate 20.57742195098974
Replicate 30.72292483963709


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_191334.p1 GENE.S_Transcript_191334~~S_Transcript_191334.p1 ORF type:5prime_partial len:314 (+),score=51.65,PPR|PF01535.16|0.43,PPR|PF01535.16|1.3,PPR|PF01535.16|28,PPR|PF01535.16|2.4,PPR|PF01535.16|5.3e+02,PPR|PF01535.16|0.4,PPR|PF01535.16|0.00028,PPR_2|PF13041.2|7,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|8.3e+02,PPR_2|PF13041.2|4.4e-05,PPR_2|PF13041.2|99,PPR_2|PF13041.2|0.015,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|4.7e+02,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|64,PPR_3|PF13812.2|9.3e+02,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|58,PPR_3|PF13812.2|89,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|20 S_Transcript_191334:3-944(+)
TCGGTTTTGCTTAACCGGATTTTGATGATGTTTGTGAGTTGTGGTTGTTTAGATGATGCCCACCAACTGTTTGATGAAATTCCCAACAGAGACTCCATTTCTTTGGCTATTATGATTGGGGGTTTTGTGAATCATCGGCTTTTTGGGCAAGCTTTGGACTTGTTTGCCGCGATGCACTGGTCTTTCTTCTATGGGGAGAGTGATATAGCTTTGCAAGTGGTTTCGGTTTGCGTTTTGGAGGCTTGTATGCATTTGGAGAATGTTAGTCTTGGAAAGGTTATTCATGGGTGGCTGTTTAAGATAGGTTATGGTAGAGAGTCGTTTGTGGGTACGGCCTTGATTGAGTTTTATGGAAAATTCGGATGTTTGTCGGAGGTAAACATTGTGTTCCATGAACAATTACGAGAGGGTGATCATTGCGATACCATGGTTTGGAGGGGTGCTATTGTAAACAATTGTCGTGGAGGGCATTTCTTGGAGGTTGTAAGGATTTTCGCGGAGATGGGAAGGGCTGGTGTAAGGAAAGATGAGAACACATTTTCAAGTGTTCTTAAGGCTTGTGTTAGAGTCAATGACAGCAGATCCTATGGGCGGCAAGTTCATGCCAATGCCATCAAGCTTGCGCTTGACACCCACATTCTCGTAATGTGTGGTTTGGTTGACATGTATGGGAGATGTGGACTGTTGAATGATGCTAGGAAAGTGTTCGACATGATTGACCATGACAAAAGAAACAGAGCGTGTTGGAAGGCAATGGTGACAGGTTTTATTCAACAGGGGTTATACATTGAAGCCATAAAAGTATTGTATGAAATGAAAGCTGCTGGCATGAACCCTCAAGAATCTCTGATTGATGAAGTGAGGTTGGCTTGTGGTAGTGAGAACTTTAGAATGAGGAATAGCAAAGAGAATGTGTATATGAACAATATTGAACCAGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_191334.p1 GENE.S_Transcript_191334~~S_Transcript_191334.p1 ORF type:5prime_partial len:314 (+),score=51.65,PPR|PF01535.16|0.43,PPR|PF01535.16|1.3,PPR|PF01535.16|28,PPR|PF01535.16|2.4,PPR|PF01535.16|5.3e+02,PPR|PF01535.16|0.4,PPR|PF01535.16|0.00028,PPR_2|PF13041.2|7,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|8.3e+02,PPR_2|PF13041.2|4.4e-05,PPR_2|PF13041.2|99,PPR_2|PF13041.2|0.015,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|4.7e+02,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|64,PPR_3|PF13812.2|9.3e+02,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|58,PPR_3|PF13812.2|89,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|20 S_Transcript_191334:3-944(+)
SVLLNRILMMFVSCGCLDDAHQLFDEIPNRDSISLAIMIGGFVNHRLFGQALDLFAAMHWSFFYGESDIALQVVSVCVLEACMHLENVSLGKVIHGWLFKIGYGRESFVGTALIEFYGKFGCLSEVNIVFHEQLREGDHCDTMVWRGAIVNNCRGGHFLEVVRIFAEMGRAGVRKDENTFSSVLKACVRVNDSRSYGRQVHANAIKLALDTHILVMCGLVDMYGRCGLLNDARKVFDMIDHDKRNRACWKAMVTGFIQQGLYIEAIKVLYEMKAAGMNPQESLIDEVRLACGSENFRMRNSKENVYMNNIEPG*

Click here to download the sequence:
Link to NCBI Protein BLAST