Transcript Information: S_Transcript_19135.p1


Annotated TAIR IDAT1G03090.2
Annotated Gene Namemethylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA)
Annotated Gene Symbol(s)MCCA
Annotation TypeOrtholog
Chromosome Positionchr1:739715-743819 | Forward length=734
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3311511750158
Replicate 23.5120358887473
Replicate 32.4088471619397
Condition 2: 8 Hour
Replicate 17.0794493025584
Replicate 29.2531183489481
Replicate 38.2943298163601
Condition 3: 24 Hour
Replicate 17.0735813207638
Replicate 24.9027837287609
Replicate 35.799354427843


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19135.p1 GENE.S_Transcript_19135~~S_Transcript_19135.p1 ORF type:complete len:735 (+),score=157.86,CPSase_L_D2|PF02786.13|5.2e-76,CPSase_L_chain|PF00289.18|9.6e-44,CPSase_L_chain|PF00289.18|1.2e+04,Biotin_carb_C|PF02785.15|6.9e-34,ATP-grasp_4|PF13535.2|1.7e-15,Dala_Dala_lig_C|PF07478.9|1.4e-10,Dala_Dala_lig_C|PF07478.9|4.3e+03,ATPgrasp_Ter|PF15632.2|1.9e-07 S_Transcript_19135:260-2464(+)
ATGGCGGCTCTTACTCTTCTACTCCGTCGTAACCACCACCGGAACTTGACGTCGCTTCTACTTTTCCGGCGATTCTCATCGTCGCCGCCGAATACCGGTGGCGGTGATAAGAAGAAGACGATAGAGAAGATACTGATAGCCAATAGAGGCGAGATTGCTTGTAGAATAATGACAACAGCTAAGCGATTAGGGATTCGAACTGTTGCGGTTTATAGTGACGCTGATCGTGATAGTCTTCACGTTAATTTCGCTGATGAGGCTGTTCATATTGGTCCTCCACCTGCGAAATTGAGTTATTTGAAAGGAATTTCGATCATCGAAGCTGCAAGAATGACCGGTGCTCAGGCTATCCACCCTGGTTATGGGTTTTTGTCAGAAAATGCTGAGTTTGCGCAGCTTTGTGAAGATGAAGGTCTATCATTCATCGGACCCCCAGCATCTGCAATACGAGATATGGGCGACAAAAGTGCATCAAAGAGGATAATGGGTGAAGCAGGTGTTCCTCTGGTGCCTGGATATCATGGTAATGATCAAGATATTGACCTAATGAAATCGGAAGCTGAAAAAATTGGTTATCCTATATTAATAAAGCCAACGCATGGAGGTGGAGGAAAGGGGATGAGAATTGTGGAAAACCCAAATGAATTTGTTGATTCGTTCTTGGCAGCAAGGAGGGAGGCTGCTGCTTCTTTTGGTGTAGACACAATCTTGCTTGAGAAATATATCACCAGACCAAGGCATATAGAAGTCCAGGTATTTGGAGATAAACATGGTCATGTATTATATTTGTATGAGAGGGATTGCAGTGTGCAAAGAAGACACCAGAAGATAATTGAAGAAGCCCCAGCACCCAATGTCAATGATAACTTCCGCTCTCAATTGGGTGAAGCTGCTGTGTCCGCAGCCAAGGCAGTTGGCTATTACAATGCTGGAACAGTTGAATTCATTGTGGATACTCTTTCAGGTCAATTTTACTTCATGGAGATGAACACGCGATTACAGGTTGAGCATCCTGTCACAGAGATGATTGTTGGACAAGATCTTGTAGAATGGCAGATTCGTGTTGCAAATGGCGAACCTCTTCCTATTTTGCAGTCTGAGGTGCCTTTGTCAGGTCATGCATTTGAGGCCCGCATATATGCTGAAAATGTTCCTAAAGGATTTCTCCCAGCAACTGGAGTTCTTCATCATTATCAACCTGTTCCAGTCTCAGAAACAGTTCGTGTTGAGACGGGAGTTAGAGAAGGAGACGCTGTTAGCATGCATTATGATCCCATGATTGCCAAGCTTGTTGTGTGGGGAGAAAATCGTGCTGCTGCATTAGTCAAATTGAAGGATTCCCTATCAAAATTTCAGGTTGCTGGTCTCCCAACTAACATCAATTTTCTTCAAAAACTTGCAAGCCATTGGGCTTTTGCGGATGGACAAGTTGAAACTCATTTTATTGAGCACCATAAAGATGAGCTTTTTGCTGATTCAAGTAACAAGCAGCTGGCTGAGAAACAGCAAAAATTTACTACACATAGTGCCATGCTTGTTGCTGCATGTCTTTGTAAAATGGAGATCAACACAGCCAAGAAAATCTATCAGGGGGAAAGGAGCTCGCTTTCAATATGGTATGCTGATCCCCCTTTTAGAGTTAACTATCATGCCAAGCGTGATGTGGAGCTTGAGTGGGAAAATGACTCTGCTACTGGTGGTCAAGTACCAGTGAAATTGGCTGTTACATACAAGCAAGATGGGAGCTATCTCATTGAGGCGCCAGAATGCAGTTCCCAAGGATTAGAAGTTAAAGTTCTGCAAAAAGGTGATCGAGATTTCAGGGTTGAAGCTGGAGGATCAAGTGCGAACATAACTTTAGCTGTTTATACTAAGGATAAAAGCAAACACATACATATTTGGCATGGTTTGCAGCACTATCACTTCCGCCAAAAAATTGGACTCGAGTTGTCTGGCGAAGGTGATAGTGAAACTGGCCACAGGCCAACAGTCGCTGAGACAGCATCTCACTCTCCAGGTACAGTATTGGCCCCCAATGGCCGGTTTATTGGTCAAAGTTCTTGCCAAGAATGGGGACAAAGTGGAGGCAGGGAAACCAATTTTAGTAATGGAAGCCATGAAGATGGAGCATGTTGTGAAGGCACCTTCTTCTGGGCTCATCGACAGGCTTCAGGTGGCTCCTGGGCAGCAAGTTTCAGATGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19135.p1 GENE.S_Transcript_19135~~S_Transcript_19135.p1 ORF type:complete len:735 (+),score=157.86,CPSase_L_D2|PF02786.13|5.2e-76,CPSase_L_chain|PF00289.18|9.6e-44,CPSase_L_chain|PF00289.18|1.2e+04,Biotin_carb_C|PF02785.15|6.9e-34,ATP-grasp_4|PF13535.2|1.7e-15,Dala_Dala_lig_C|PF07478.9|1.4e-10,Dala_Dala_lig_C|PF07478.9|4.3e+03,ATPgrasp_Ter|PF15632.2|1.9e-07 S_Transcript_19135:260-2464(+)
MAALTLLLRRNHHRNLTSLLLFRRFSSSPPNTGGGDKKKTIEKILIANRGEIACRIMTTAKRLGIRTVAVYSDADRDSLHVNFADEAVHIGPPPAKLSYLKGISIIEAARMTGAQAIHPGYGFLSENAEFAQLCEDEGLSFIGPPASAIRDMGDKSASKRIMGEAGVPLVPGYHGNDQDIDLMKSEAEKIGYPILIKPTHGGGGKGMRIVENPNEFVDSFLAARREAAASFGVDTILLEKYITRPRHIEVQVFGDKHGHVLYLYERDCSVQRRHQKIIEEAPAPNVNDNFRSQLGEAAVSAAKAVGYYNAGTVEFIVDTLSGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPILQSEVPLSGHAFEARIYAENVPKGFLPATGVLHHYQPVPVSETVRVETGVREGDAVSMHYDPMIAKLVVWGENRAAALVKLKDSLSKFQVAGLPTNINFLQKLASHWAFADGQVETHFIEHHKDELFADSSNKQLAEKQQKFTTHSAMLVAACLCKMEINTAKKIYQGERSSLSIWYADPPFRVNYHAKRDVELEWENDSATGGQVPVKLAVTYKQDGSYLIEAPECSSQGLEVKVLQKGDRDFRVEAGGSSANITLAVYTKDKSKHIHIWHGLQHYHFRQKIGLELSGEGDSETGHRPTVAETASHSPGTVLAPNGRFIGQSSCQEWGQSGGRETNFSNGSHEDGACCEGTFFWAHRQASGGSWAASFRW*

Click here to download the sequence:
Link to NCBI Protein BLAST