Transcript Information: S_Transcript_19136.p1


Annotated TAIR IDAT1G03090.2
Annotated Gene Namemethylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA)
Annotated Gene Symbol(s)MCCA
Annotation TypeOrtholog
Chromosome Positionchr1:739715-743819 | Forward length=734
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4386293310921
Replicate 29.1631746952582
Replicate 311.774596289933
Condition 2: 8 Hour
Replicate 117.197895417043
Replicate 217.16979243721
Replicate 319.310324308814
Condition 3: 24 Hour
Replicate 110.687550524968
Replicate 27.2499827354445
Replicate 35.6953003495423


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19136.p1 GENE.S_Transcript_19136~~S_Transcript_19136.p1 ORF type:complete len:744 (+),score=171.13,CPSase_L_D2|PF02786.13|5.3e-76,CPSase_L_chain|PF00289.18|9.8e-44,CPSase_L_chain|PF00289.18|1.2e+04,Biotin_carb_C|PF02785.15|7e-34,Biotin_carb_C|PF02785.15|3.6e+03,Biotin_lipoyl|PF00364.18|1.1e-15,ATP-grasp_4|PF13535.2|1.7e-15,Dala_Dala_lig_C|PF07478.9|1.4e-10,Dala_Dala_lig_C|PF07478.9|4.3e+03,Biotin_lipoyl_2|PF13533.2|0.002,Biotin_lipoyl_2|PF13533.2|0.0051,ATPgrasp_Ter|PF15632.2|2e-07,HlyD_D23|PF16576.1|2.6e-07,HlyD_3|PF13437.2|2.1,HlyD_3|PF13437.2|0.035 S_Transcript_19136:260-2491(+)
ATGGCGGCTCTTACTCTTCTACTCCGTCGTAACCACCACCGGAACTTGACGTCGCTTCTACTTTTCCGGCGATTCTCATCGTCGCCGCCGAATACCGGTGGCGGTGATAAGAAGAAGACGATAGAGAAGATACTGATAGCCAATAGAGGCGAGATTGCTTGTAGAATAATGACAACAGCTAAGCGATTAGGGATTCGAACTGTTGCGGTTTATAGTGACGCTGATCGTGATAGTCTTCACGTTAATTTCGCTGATGAGGCTGTTCATATTGGTCCTCCACCTGCGAAATTGAGTTATTTGAAAGGAATTTCGATCATCGAAGCTGCAAGAATGACCGGTGCTCAGGCTATCCACCCTGGTTATGGGTTTTTGTCAGAAAATGCTGAGTTTGCGCAGCTTTGTGAAGATGAAGGTCTATCATTCATCGGACCCCCAGCATCTGCAATACGAGATATGGGCGACAAAAGTGCATCAAAGAGGATAATGGGTGAAGCAGGTGTTCCTCTGGTGCCTGGATATCATGGTAATGATCAAGATATTGACCTAATGAAATCGGAAGCTGAAAAAATTGGTTATCCTATATTAATAAAGCCAACGCATGGAGGTGGAGGAAAGGGGATGAGAATTGTGGAAAACCCAAATGAATTTGTTGATTCGTTCTTGGCAGCAAGGAGGGAGGCTGCTGCTTCTTTTGGTGTAGACACAATCTTGCTTGAGAAATATATCACCAGACCAAGGCATATAGAAGTCCAGGTATTTGGAGATAAACATGGTCATGTATTATATTTGTATGAGAGGGATTGCAGTGTGCAAAGAAGACACCAGAAGATAATTGAAGAAGCCCCAGCACCCAATGTCAATGATAACTTCCGCTCTCAATTGGGTGAAGCTGCTGTGTCCGCAGCCAAGGCAGTTGGCTATTACAATGCTGGAACAGTTGAATTCATTGTGGATACTCTTTCAGGTCAATTTTACTTCATGGAGATGAACACGCGATTACAGGTTGAGCATCCTGTCACAGAGATGATTGTTGGACAAGATCTTGTAGAATGGCAGATTCGTGTTGCAAATGGCGAACCTCTTCCTATTTTGCAGTCTGAGGTGCCTTTGTCAGGTCATGCATTTGAGGCCCGCATATATGCTGAAAATGTTCCTAAAGGATTTCTCCCAGCAACTGGAGTTCTTCATCATTATCAACCTGTTCCAGTCTCAGAAACAGTTCGTGTTGAGACGGGAGTTAGAGAAGGAGACGCTGTTAGCATGCATTATGATCCCATGATTGCCAAGCTTGTTGTGTGGGGAGAAAATCGTGCTGCTGCATTAGTCAAATTGAAGGATTCCCTATCAAAATTTCAGGTTGCTGGTCTCCCAACTAACATCAATTTTCTTCAAAAACTTGCAAGCCATTGGGCTTTTGCGGATGGACAAGTTGAAACTCATTTTATTGAGCACCATAAAGATGAGCTTTTTGCTGATTCAAGTAACAAGCAGCTGGCTGAGAAACAGCAAAAATTTACTACACATAGTGCCATGCTTGTTGCTGCATGTCTTTGTAAAATGGAGATCAACACAGCCAAGAAAATCTATCAGGGGGAAAGGAGCTCGCTTTCAATATGGTATGCTGATCCCCCTTTTAGAGTTAACTATCATGCCAAGCGTGATGTGGAGCTTGAGTGGGAAAATGACTCTGCTACTGGTGGTCAAGTACCAGTGAAATTGGCTGTTACATACAAGCAAGATGGGAGCTATCTCATTGAGGCGCCAGAATGCAGTTCCCAAGGATTAGAAGTTAAAGTTCTGCAAAAAGGTGATCGAGATTTCAGGGTTGAAGCTGGAGGATCAAGTGCGAACATAACTTTAGCTGTTTATACTAAGGATAAAAGCAAACACATACATATTTGGCATGGTTTGCAGCACTATCACTTCCGCCAAAAAATTGGACTCGAGTTGTCTGGCGAAGGTGAGAGTGAAACTGGACACCGGCCAACAGTCGCTGAGACAGCATCTCACTCTCCAGGTACAGTATTGGCACCAATGGCTGGTTTAGTGGTCAAGGTTCTTGCCAAGAATGGGGACAAAGTGGAGGCAGGGAAACCAATTTTAGTAATGGAAGCCATGAAGATGGAGCATGTTGTGAAGGCACCTTCTTCTGGGCTCATCGACAGGCTTCAGGTGGCTCCTGGGCAGCAAGTTTCAGATGGTAGCACTCTCTTCACTATCAAGGATGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19136.p1 GENE.S_Transcript_19136~~S_Transcript_19136.p1 ORF type:complete len:744 (+),score=171.13,CPSase_L_D2|PF02786.13|5.3e-76,CPSase_L_chain|PF00289.18|9.8e-44,CPSase_L_chain|PF00289.18|1.2e+04,Biotin_carb_C|PF02785.15|7e-34,Biotin_carb_C|PF02785.15|3.6e+03,Biotin_lipoyl|PF00364.18|1.1e-15,ATP-grasp_4|PF13535.2|1.7e-15,Dala_Dala_lig_C|PF07478.9|1.4e-10,Dala_Dala_lig_C|PF07478.9|4.3e+03,Biotin_lipoyl_2|PF13533.2|0.002,Biotin_lipoyl_2|PF13533.2|0.0051,ATPgrasp_Ter|PF15632.2|2e-07,HlyD_D23|PF16576.1|2.6e-07,HlyD_3|PF13437.2|2.1,HlyD_3|PF13437.2|0.035 S_Transcript_19136:260-2491(+)
MAALTLLLRRNHHRNLTSLLLFRRFSSSPPNTGGGDKKKTIEKILIANRGEIACRIMTTAKRLGIRTVAVYSDADRDSLHVNFADEAVHIGPPPAKLSYLKGISIIEAARMTGAQAIHPGYGFLSENAEFAQLCEDEGLSFIGPPASAIRDMGDKSASKRIMGEAGVPLVPGYHGNDQDIDLMKSEAEKIGYPILIKPTHGGGGKGMRIVENPNEFVDSFLAARREAAASFGVDTILLEKYITRPRHIEVQVFGDKHGHVLYLYERDCSVQRRHQKIIEEAPAPNVNDNFRSQLGEAAVSAAKAVGYYNAGTVEFIVDTLSGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPILQSEVPLSGHAFEARIYAENVPKGFLPATGVLHHYQPVPVSETVRVETGVREGDAVSMHYDPMIAKLVVWGENRAAALVKLKDSLSKFQVAGLPTNINFLQKLASHWAFADGQVETHFIEHHKDELFADSSNKQLAEKQQKFTTHSAMLVAACLCKMEINTAKKIYQGERSSLSIWYADPPFRVNYHAKRDVELEWENDSATGGQVPVKLAVTYKQDGSYLIEAPECSSQGLEVKVLQKGDRDFRVEAGGSSANITLAVYTKDKSKHIHIWHGLQHYHFRQKIGLELSGEGESETGHRPTVAETASHSPGTVLAPMAGLVVKVLAKNGDKVEAGKPILVMEAMKMEHVVKAPSSGLIDRLQVAPGQQVSDGSTLFTIKDE*

Click here to download the sequence:
Link to NCBI Protein BLAST