Transcript Information: S_Transcript_191878.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31935601482217
Replicate 20.35300463292024
Replicate 31.106564165016
Condition 2: 8 Hour
Replicate 10.93831717395385
Replicate 20.62641176191235
Replicate 30.59684373293948
Condition 3: 24 Hour
Replicate 10.61165673773664
Replicate 20.54393147783234
Replicate 30.90799359858418


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_191878.p1 GENE.S_Transcript_191878~~S_Transcript_191878.p1 ORF type:complete len:250 (+),score=59.97 S_Transcript_191878:536-1285(+)
ATGAGGGGAAAACTGAAGGTGCCTTCCAAACAAAGCACAAAGAAAAGCGAAGAAATTTCAAAAGCAACAAAAAGAAGCAATATGCCAAGGGTTATGTTAAAGGCCAATTCAATTGGAAATGAGAAGAAAGGAGCATTTCCACCTTGTGGCATTTGTAAGAAAACAAATCATCTAGAGTGGAACAAGGGAAAATCTCCTTGTGGTATTTGCAAGAAGTTTGGCCATGATGAGAAAGATTGTTGGCATAAAGACCAAAAGGCAAAGGCTAACATGATGGAGAGCAAGGACCCCGTGGAACGCATCTTTTATACTTCTCAAGCTTCACTAGCAAGCACAAAAGATGTGTGCCTTATTGATAGTGATTGCACAACCCACATGACCAATAATGAAAGTATCATTACTGAAATTGATAAATCAGTGAACATTCCTCTCAAAATGGTTGATGATTCTATCATTAAGTCTCAAGGAAAAGGTATTATTGCTATTAAGCCAAACACTGGAACGCAACACATCAAGAATGTTTTGCTAGTTCCTGATTTTGATCAAAAATTGCTGAGTGTCCCTCAAATGATGCAAAGTGGTTACTCATTGTCTTTTGAAAGCAATTCATGCAATATTTATGATCAGCATGGAAAGGAAATTGCCCGAGCTCTTGTTGGGAGTTGTCTCCAGGAAGATGCTAGATGGGTGAACATGATGATTCTTGGCTTTGGCATGAAAAGCTCTGACATTACAACTTTCATGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_191878.p1 GENE.S_Transcript_191878~~S_Transcript_191878.p1 ORF type:complete len:250 (+),score=59.97 S_Transcript_191878:536-1285(+)
MRGKLKVPSKQSTKKSEEISKATKRSNMPRVMLKANSIGNEKKGAFPPCGICKKTNHLEWNKGKSPCGICKKFGHDEKDCWHKDQKAKANMMESKDPVERIFYTSQASLASTKDVCLIDSDCTTHMTNNESIITEIDKSVNIPLKMVDDSIIKSQGKGIIAIKPNTGTQHIKNVLLVPDFDQKLLSVPQMMQSGYSLSFESNSCNIYDQHGKEIARALVGSCLQEDARWVNMMILGFGMKSSDITTFMH*

Click here to download the sequence:
Link to NCBI Protein BLAST