Transcript Information: S_Transcript_191880.p1


Annotated TAIR IDAT2G39100.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16317462-16318869 | Forward length=296
E-Value2.8E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4063781140542
Replicate 21.7040365918406
Replicate 31.349468493922
Condition 2: 8 Hour
Replicate 11.8204601490235
Replicate 22.7282742243569
Replicate 31.7329957402424
Condition 3: 24 Hour
Replicate 13.1968122181357
Replicate 21.8425863070201
Replicate 31.9480440800699


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_191880.p1 GENE.S_Transcript_191880~~S_Transcript_191880.p1 ORF type:internal len:246 (+),score=11.92,zf-RING_2|PF13639.2|4.9e-08,zf-C3HC4_3|PF13920.2|9.9e-07,zf-C3HC4|PF00097.21|4.1e-06 S_Transcript_191880:1-735(+)
CGCCACAAAATCTCCACCTTCCCTGATTTCTACCTCCCCTTGTGGGTCACGAATCATAGTGGAAGCAAAACTCCTCCCCTCTTCATCTGCAACCTCCCGCACTCCTACATCAAGATGAAGAATCTTACAAAAGGCTCTTCTCCGTCCAAACGAATATCATTATCAGCAATAAAAGACAAAACCTGCCCTATCTGCTTATCTCAAATCACCGGCCACCGCCCTGCCCTCATCAGTTCTTGCTTACACCCCTACTGTCTTACTTGCCTTCTTCGTTGGGCCAATCACAAGCGAACTTGCCCTCTTTGTATCTCTCCCTTTGATTCGTACTTCACTACTTCTCATGTCTCTTCTAGAACTTTCCAGAAACACCGCTTGCTCCCTCTTCGACGCCCTCAACCCAACCCTCCGGTGAGGAGAAGATACAGACAAATTCATTCACCTATAGCGTTCCAAAGGATTCTTAGGAGGACAAGGGAGGAGGTTAATGTGGCCAACCGGCGGTCTAGAGAAGTGCCGCGTCAGCGATCATTTGGTCGGTTGGGGTCTGTGCCTTCTCAGGTTATTGCTGAAAGGGTTCTACAATGGCGTGCCAGCATTTATCGACATGGTTTGCAGGCTGTTCCCTTCTCTAACAACAATTTTCCGATCTTGAGCGGGACACTAAGTAATGGTAATAGAGACAGAATACTGCAAAGAATAGAACCATGGATCCGAAGAGAATTGCAAGCTGTACTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_191880.p1 GENE.S_Transcript_191880~~S_Transcript_191880.p1 ORF type:internal len:246 (+),score=11.92,zf-RING_2|PF13639.2|4.9e-08,zf-C3HC4_3|PF13920.2|9.9e-07,zf-C3HC4|PF00097.21|4.1e-06 S_Transcript_191880:1-735(+)
RHKISTFPDFYLPLWVTNHSGSKTPPLFICNLPHSYIKMKNLTKGSSPSKRISLSAIKDKTCPICLSQITGHRPALISSCLHPYCLTCLLRWANHKRTCPLCISPFDSYFTTSHVSSRTFQKHRLLPLRRPQPNPPVRRRYRQIHSPIAFQRILRRTREEVNVANRRSREVPRQRSFGRLGSVPSQVIAERVLQWRASIYRHGLQAVPFSNNNFPILSGTLSNGNRDRILQRIEPWIRRELQAVL

Click here to download the sequence:
Link to NCBI Protein BLAST