Transcript Information: S_Transcript_192210.p2


Annotated TAIR IDAT5G65260.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26080501-26082984 | Reverse length=220
E-Value2.4E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.0227305198
Replicate 213.515943152351
Replicate 312.959760491179
Condition 2: 8 Hour
Replicate 115.561771312503
Replicate 217.93778854897
Replicate 314.786669059311
Condition 3: 24 Hour
Replicate 113.382451147391
Replicate 215.925921648244
Replicate 312.04295813938


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_192210.p2 GENE.S_Transcript_192210~~S_Transcript_192210.p2 ORF type:3prime_partial len:111 (-),score=20.77,RRM_1|PF00076.18|2.5e-14,RRM_6|PF14259.2|7e-10,RRM_5|PF13893.2|35,RRM_5|PF13893.2|5.3e-07 S_Transcript_192210:3-332(-)
ATGCTCAGATCAAAACCATTTGTGCAGGTTGATTATGCATGCACCCCAGAAGAAGTCCAGCAACATTTTCAATCTTGTGGAACAGTGAATAGAGTGACCATTCTGACAGACAAGTTTGGCCAGCCAAAGGGTTTTGCCTATGTTGAATTTGTTGAGCAGGAAGCTGTTCAACAGGCTCTCCTATTGAATGAATCTGAATTACATGGGCGTCAATTGAAGGTTCTGCCAAAGAGGACAAACGTGCCAGGCATGAAACAATACAGGGCAAGGCGTTTCAATCCTTATATGCCATTTCGTTCCCGCAGGCCATATCCTCCCTCCTACTTCTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_192210.p2 GENE.S_Transcript_192210~~S_Transcript_192210.p2 ORF type:3prime_partial len:111 (-),score=20.77,RRM_1|PF00076.18|2.5e-14,RRM_6|PF14259.2|7e-10,RRM_5|PF13893.2|35,RRM_5|PF13893.2|5.3e-07 S_Transcript_192210:3-332(-)
MLRSKPFVQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEQEAVQQALLLNESELHGRQLKVLPKRTNVPGMKQYRARRFNPYMPFRSRRPYPPSYFY

Click here to download the sequence:
Link to NCBI Protein BLAST