Transcript Information: S_Transcript_192328.p1


Annotated TAIR IDAT5G23400.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7880603-7882372 | Forward length=589
E-Value4.3E-236
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1544625838027
Replicate 21.9521332997467
Replicate 31.4163036057523
Condition 2: 8 Hour
Replicate 11.1036512518049
Replicate 20.70962458122672
Replicate 32.2063147771433
Condition 3: 24 Hour
Replicate 10.69290949302385
Replicate 21.3999349387727
Replicate 31.0526729718329


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_192328.p1 GENE.S_Transcript_192328~~S_Transcript_192328.p1 ORF type:complete len:599 (+),score=84.12,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|3.5e-08,LRR_8|PF13855.2|1.6e-09,LRR_8|PF13855.2|1.3e-06,LRR_8|PF13855.2|5.7e-10,LRR_8|PF13855.2|0.2,LRR_8|PF13855.2|1.5e-05,LRR_8|PF13855.2|3.7e-06,LRR_8|PF13855.2|5.9e-06,LRR_4|PF12799.3|1.5e+02,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|5.3,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.0045,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|0.0003,LRR_4|PF12799.3|0.026,LRR_4|PF12799.3|7.2e+02,LRR_4|PF12799.3|7.7,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.061,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|22,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|85,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|90,LRR_1|PF00560.29|6.7e+02,LRR_1|PF00560.29|0.048,LRR_1|PF00560.29|93,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|16,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|1.1e+03,LRRNT_2|PF08263.8|3.7e-10 S_Transcript_192328:280-2076(+)
ATGCAGAAATTGAGATGGGTTTTGAAGTTCTTGGTGATTCTTGCAGTTTTTTGTCAGTTATCAGCATCTGTTTCTGATGCTGCTTGTTCACCAGCTGATAGAGCTGCACTTCTAAGCTTCAAAGCCAAGATCATCAAGGATACAACAGGTACTCTTTCCTCTTGGGTTGGTACTGATTGTTGTGGAGGTGATTGGGAAGGTGTACAGTGCAACTTAGCCACTGGGAGAGTCACTTCTCTTGTGCTTCAGAAACTTTCCTCGGACGATGGAGACGCTGCGCCTGATGACCTGTATATGGAGGGCACTCTCTCCCCTGCTTTGGGCAACTTGCAGTTCCTCGAAACTCTGGTCATAAGTGGGATGAAGCACATCAGGGGCGCCATTCCCGAGAGCCTCTCGAGGTTGGGACACCTTTCACAGCTTGTCCTTGAGGGTAACTCTTTAATGGGAGCTATCCCTTCGAGCCTTGGTCGTCTGCCTTTACTCAACACCCTCATATTGGATGGCAATCGATTGAAGGGTCCAATTCCGCCTTCCTTGGGAAACCTCAAGGGACTGCAACAGCTTAATTTAGGCAAAAACTACCTGGTTGGTTCTATCCCAGCTACCTTCAGAAATCTTCAGAGCTTGCAGTTGCTTGATCTTAGCTCTAATTTAGTTTCTGGCTTGATCCCTGATTTCGTTGGACAGTTTCACAACCTCACTTTCCTTGATCTTTCTAATAACCAGCTCACTGGTCCCATGCCCATCGCACTTTGTAGCCTTGCCGCGCTCTCTGACATTTCCCTGAGCAACAACCAGCTCACAGGAAGGATTCCTGAGCAAATTAGTGGCCTTAAAGCCCTCACCAGCCTTTCGCTTAGCAATAACCGTTTTACAGGTCAAATTCCTGAATCACTTGCTACATTACACAGCTTATGGTACCTCAATTTGTCTCAAAATGCACTCTCGAATCCCTTGCCAAATACCCTTGTCAAAGGTTTGCCTTCTCTTTTGTCAATTGACTTGTCCTACAACAAATTCAGCTTGGAGACGGTTCCTGATTGGATCAGGAGTCGCGAGCTCTCAGCTGTCCATTTAGCCGGTTGCAACCTCAGAGGAATACTTCCAATCTTCATGAGGCCTGCCTCCTTGACCTCCTTGGACCTGTCTAATAACCATTTCACAGGCGGTATCTCGAATTTCTTCATAAGGATGTCCAACCTGCAGTTTCTCAAGCTGTCCAACAACCAACTCAAGGACGACATTTCAAAGATAGCATTGCCAAAAGGGATCTCTTCTATCGACCTCAGTTCAAATCAGCTCTTTGGCCCCATTTCAGGGATCTTCAACAGCCATACAAGCAGCTTTTTAGAGATTGTTGACGTCTCAAAGAACATGATCTCCGGCACAATTCCTGAGTTTCCAGAGGGACTGAGCTTGAAAGTACTCAACATAGGAAGCAACAAGATCACAGGACAAATACCAAGATCAGTCTCCAGTCTGGTCGAGCTCCAAAGATTCGATATAAGTAGAAATCAGATTACAGGAACAATACCAGCAAATCTAGGCCTGTTGGTTAAGCTAGAATGGCTAGACTTGTCGATTAACAGCCTCACAGGAATAATCCCCGAAAGCTTGCTCAAGATACCCAATCTCAAGCACGTCAGTTTTCGGGCAAACAGATTGTGTGGGCAGATACCACAGGGAAGGCCCTTCAACATCTTTCCTACAGTTGCTTATGCACACAACAAATGTTTGTGTGGCAAACCCCTGACACCTTGTCAGGGGAAGAGACCACCAAATATGGGCCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_192328.p1 GENE.S_Transcript_192328~~S_Transcript_192328.p1 ORF type:complete len:599 (+),score=84.12,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|3.5e-08,LRR_8|PF13855.2|1.6e-09,LRR_8|PF13855.2|1.3e-06,LRR_8|PF13855.2|5.7e-10,LRR_8|PF13855.2|0.2,LRR_8|PF13855.2|1.5e-05,LRR_8|PF13855.2|3.7e-06,LRR_8|PF13855.2|5.9e-06,LRR_4|PF12799.3|1.5e+02,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|5.3,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.0045,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|0.0003,LRR_4|PF12799.3|0.026,LRR_4|PF12799.3|7.2e+02,LRR_4|PF12799.3|7.7,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.061,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|22,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|85,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|90,LRR_1|PF00560.29|6.7e+02,LRR_1|PF00560.29|0.048,LRR_1|PF00560.29|93,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|16,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|1.1e+03,LRRNT_2|PF08263.8|3.7e-10 S_Transcript_192328:280-2076(+)
MQKLRWVLKFLVILAVFCQLSASVSDAACSPADRAALLSFKAKIIKDTTGTLSSWVGTDCCGGDWEGVQCNLATGRVTSLVLQKLSSDDGDAAPDDLYMEGTLSPALGNLQFLETLVISGMKHIRGAIPESLSRLGHLSQLVLEGNSLMGAIPSSLGRLPLLNTLILDGNRLKGPIPPSLGNLKGLQQLNLGKNYLVGSIPATFRNLQSLQLLDLSSNLVSGLIPDFVGQFHNLTFLDLSNNQLTGPMPIALCSLAALSDISLSNNQLTGRIPEQISGLKALTSLSLSNNRFTGQIPESLATLHSLWYLNLSQNALSNPLPNTLVKGLPSLLSIDLSYNKFSLETVPDWIRSRELSAVHLAGCNLRGILPIFMRPASLTSLDLSNNHFTGGISNFFIRMSNLQFLKLSNNQLKDDISKIALPKGISSIDLSSNQLFGPISGIFNSHTSSFLEIVDVSKNMISGTIPEFPEGLSLKVLNIGSNKITGQIPRSVSSLVELQRFDISRNQITGTIPANLGLLVKLEWLDLSINSLTGIIPESLLKIPNLKHVSFRANRLCGQIPQGRPFNIFPTVAYAHNKCLCGKPLTPCQGKRPPNMGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST