Transcript Information: S_Transcript_19241.p1


Annotated TAIR IDAT5G60410.2
Annotated Gene NameDNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
Annotated Gene Symbol(s)ATSIZ1, SIZ1
Annotation TypeOrtholog
Chromosome Positionchr5:24295226-24300792 | Forward length=885
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.189698807312
Replicate 221.424398655966
Replicate 321.751328783783
Condition 2: 8 Hour
Replicate 122.238630411732
Replicate 223.278115656382
Replicate 320.748411846978
Condition 3: 24 Hour
Replicate 121.212797741445
Replicate 218.414346905782
Replicate 317.632077338762


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19241.p1 GENE.S_Transcript_19241~~S_Transcript_19241.p1 ORF type:complete len:864 (+),score=209.87,zf-MIZ|PF02891.16|1.1e-18,SAP|PF02037.23|5.4e-08,PHD|PF00628.25|3.1e-05,PHD|PF00628.25|0.82 S_Transcript_19241:300-2891(+)
ATGGATTTGGTATCTAGTTGTAAGGACAAATTGCAATATTTTAGGATCAAGGAGCTCAAAGATGTGCTTACTCAACTTGGTCTCTCAAAGCAAGGGAAGAAACAGGATCTTGTTGATCGGATATTGGCAATTCTTGCTGATGATCAAGTTTCCAAGATGTGGGCCAAGAGACCTGCAATCGCAAGGGAAGAAGCAGCTAGACTAGTGGATGATACTTACAGGAAAATGCAGATTTCAGGGGCAACTGACTTGGCATCAAAGGTACAAGCTACATCCAGTAGCAGTCCCTTGAAACCTAAAGAGGAAATTGAAGTTGATGATTCTTTCCAGTTGGACATGAAAGTCCGCTGTCCCTGTGGAAATTCGCTGCTTACGGAAACAATGATCAAGTGCGAGGATCCAAGGTGTCAGATATGGCAGCATATTAGCTGTGTTATTATACCGGAGAAGCCTATGGATGGGATTCCACCAGTTCCTTCCCTGTTTTACTGTGAACTTTGCAGACTCAGTCGAGCTGATCCCTTTTGGTCAACAGTGCAACAGCTTGTATTTCCTGTGAAGTTGATTAAAACCAATGTGCCAACTGATGGTACAAACCCAGTGCAAGCGGTGGAGAAGACATTTCACCTGACAAGGTCAGACAGAGAGTTGTTGTCAAAGCCTGAGTATGCAGTTCAGGTTTGGTGTATGCTTCTTAATGATAAGGTTCCTTTTAGGATGCAGTGGCCACAGTATGCTGATCTGCAGGTCAATGGTATGCCAGTTCGAGCAATTAATAGACCTGGCTCACAATTGCTGGGGGCCAATGGTCGTGATGATGGTCCAAATATCTCACAATGCACCAGAGATGGAATTAACAAGATCTCTATGACAGGATGTGATGCTCGCATTTTCTGCATCGGTGTTAGATTAGTTAAAAGGCGTTCTCTTCAACAGATTATGAACATGATCCCAAGGGAACCAGATGGTGAGCGTTTTAAGGATGCTCTTGCTCGTGTTCGTCGTTGTGTTGGTGGAGGGGGTGCGGCTGAGAATGCTGACAGTGACAGTGACTTGGAAGTGGTTGCAGACTCTTTTACGATTAACTTGCGTTGTCCTATGAGTGGTTCAAGGATGAAGATGGCTGGCAGATTCAAACCCTGTGTCCATATGGGATGTTTTGACCTTGAAACTTTTGTAGAGATGCAGCAACGTTCGAGAAAGTGGCAGTGCCCCATATGCTTGAAGAACTATTCCCTGGAACATATAATTATTGACCCTTACTTTAATCGCGTCACAACTTCGATGCTATCTTGTGGTGAGGACACAACTGAAATAGAGGTGAAGCCTGATGGTTCTTGGCGTGTTAAGAGCGAAAGTGAACGCTTGGATCTCAGGCAATGGCATTTACCGGACGGAAGGCTTTGTCTTCCTGAGGAGGAAGAGGTCAAACAAACACCTGAAGCATCGAAGCCTGTTAAGAATGAAGGCACTGGTTTGAAACTGGGAATCAAGAAGAACAGCAATGGTTTATGGGAAGTTAGTAAACCTGATGCAAATACTCTCTCTTCAAGTGATAGAGTACCAGAAAAAATCGAAAATGGTGGTCATAGGGTTATTCGCATGAGTAGTAGTGCCACTGGTAGTGGTAGAGATGGTGAAGAAAGTGTTAATCAGGGCGGAAATGGTAATTTTGATTTGTCTCTTAACAATGCAGTAGAGTTTGAATCTATATCTTTAAATCTTGAATCAGCATATGGGGTGAATCAGAATGCTTCAGCAGCAGTTGCAAGGGATGCAGATGTTATTGTGCTAAGTGACTCAGAGGAAGAAAATGACATGATATCACCTGGAGCCATCCACCAAAATGGCCCGATGGATAATGGAATTGATTTTGTTGTTGGTCCTCATGAAATGAATACATCATATCAGGGAGACCCTGGTCTTGGAGGAGGTGGAAGTTCATGTCTTGATCTTTTTAACCCTGCTGATGAATTCGGACTGCCACTCTGGCCTTCTACTCAAGCAGGCTCCAGTTTCCAGCTATTTGGTTCTGGTTGTGATGTCTCAGATGCTTTAGCTAATCCTCATCTGAGTTCTGTAAGCTGTCAGACATCGATGAATGGCTATATGTTGGCTCCAGATGCTGCTATAAATCCTGCTTCTTTGGTCCCCGATCATGCAGTTGGTCATTCCAATAATGATCTAAATGATGGTTTGGTAGACAATCCCTTGGCTTTTGGTGCAGAGGATCCATCTCTACAAATTTTTCTTCCTACAAGGCCTTCAGATATATCTGGACAAAATGATACGAGAAATCAGCAGGATATGACCAATGGTTTGCGCAGTGATGATTGGATATCTCTTCGGCTAGGAGATGGTGGTGGGGGTTGTAATGGGGATGCCATTGCTATGAATGGACTGACTTCTGGACAACATCTACATTCTAGGGGAGCCATGGATACACTGGCTGATACAGCTTCTTGCCTTATGGGTTCGAATGGCGGCAGACCTGACAAAACTAGAGAACGGTCAGATAGTCCTTTCTCCTTTGCTCGTCCGAAACGTTCACGGCAACGTTTGTACCTCTCCATCGATTCAGATTCTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19241.p1 GENE.S_Transcript_19241~~S_Transcript_19241.p1 ORF type:complete len:864 (+),score=209.87,zf-MIZ|PF02891.16|1.1e-18,SAP|PF02037.23|5.4e-08,PHD|PF00628.25|3.1e-05,PHD|PF00628.25|0.82 S_Transcript_19241:300-2891(+)
MDLVSSCKDKLQYFRIKELKDVLTQLGLSKQGKKQDLVDRILAILADDQVSKMWAKRPAIAREEAARLVDDTYRKMQISGATDLASKVQATSSSSPLKPKEEIEVDDSFQLDMKVRCPCGNSLLTETMIKCEDPRCQIWQHISCVIIPEKPMDGIPPVPSLFYCELCRLSRADPFWSTVQQLVFPVKLIKTNVPTDGTNPVQAVEKTFHLTRSDRELLSKPEYAVQVWCMLLNDKVPFRMQWPQYADLQVNGMPVRAINRPGSQLLGANGRDDGPNISQCTRDGINKISMTGCDARIFCIGVRLVKRRSLQQIMNMIPREPDGERFKDALARVRRCVGGGGAAENADSDSDLEVVADSFTINLRCPMSGSRMKMAGRFKPCVHMGCFDLETFVEMQQRSRKWQCPICLKNYSLEHIIIDPYFNRVTTSMLSCGEDTTEIEVKPDGSWRVKSESERLDLRQWHLPDGRLCLPEEEEVKQTPEASKPVKNEGTGLKLGIKKNSNGLWEVSKPDANTLSSSDRVPEKIENGGHRVIRMSSSATGSGRDGEESVNQGGNGNFDLSLNNAVEFESISLNLESAYGVNQNASAAVARDADVIVLSDSEEENDMISPGAIHQNGPMDNGIDFVVGPHEMNTSYQGDPGLGGGGSSCLDLFNPADEFGLPLWPSTQAGSSFQLFGSGCDVSDALANPHLSSVSCQTSMNGYMLAPDAAINPASLVPDHAVGHSNNDLNDGLVDNPLAFGAEDPSLQIFLPTRPSDISGQNDTRNQQDMTNGLRSDDWISLRLGDGGGGCNGDAIAMNGLTSGQHLHSRGAMDTLADTASCLMGSNGGRPDKTRERSDSPFSFARPKRSRQRLYLSIDSDSE*

Click here to download the sequence:
Link to NCBI Protein BLAST