Transcript Information: S_Transcript_192466.p1


Annotated TAIR IDAT5G08720.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2841536-2845335 | Reverse length=719
E-Value3E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.10361087687416
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.12732478413678
Replicate 30.28339375736085


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_192466.p1 GENE.S_Transcript_192466~~S_Transcript_192466.p1 ORF type:internal len:178 (-),score=46.41,Polyketide_cyc|PF03364.16|5.1e-09,Polyketide_cyc|PF03364.16|2e+03 S_Transcript_192466:1-531(-)
CTTGAGCAAGAGGTTAGTTTTGAACAGGTTGAAGGGGACTTTGACTCCTTTTGTGGAAGGTGGCAGCTTGAGCAGCTGGGAAACCATCACACACTGCTAAAATACTCTGTGGAATCAAAAATGCGCCAGGATACCTTTCTGTCAGAAGCTATTACGGAAGAGGTTATATATGAGGATCTTCCATCCAACCTGTGTGCTATCCGGGACTACATTGAGAAGAGGATAGGAACAAATTCCTCTGAGGTGTATGATCAAGAAAATGTGGAGCGGCAGTGTGGTGAAATACACCAAGAGCAGCGTAGCACTTCATCCAGTAAAGAGCATGGACAGGAAGGTTTTATGCCCATGAGGAAGCAACTTCGTGTTCATGGTAGGGTTGACATTGAGAAGGCAATCAACAGGATGGGTGGGTTTAGAAAAATTGCTTCCCTGATGAATCTCTCTCTTGCTTACAAACATCGAAAACCAAAGGGTTATTGGGATAACCTTGAAAATTTGCAGGAAGAAATTACTCGTTTTCAGAAGAACTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_192466.p1 GENE.S_Transcript_192466~~S_Transcript_192466.p1 ORF type:internal len:178 (-),score=46.41,Polyketide_cyc|PF03364.16|5.1e-09,Polyketide_cyc|PF03364.16|2e+03 S_Transcript_192466:1-531(-)
LEQEVSFEQVEGDFDSFCGRWQLEQLGNHHTLLKYSVESKMRQDTFLSEAITEEVIYEDLPSNLCAIRDYIEKRIGTNSSEVYDQENVERQCGEIHQEQRSTSSSKEHGQEGFMPMRKQLRVHGRVDIEKAINRMGGFRKIASLMNLSLAYKHRKPKGYWDNLENLQEEITRFQKNW

Click here to download the sequence:
Link to NCBI Protein BLAST