Transcript Information: S_Transcript_192467.p1


Annotated TAIR IDAT5G08720.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2841536-2845335 | Reverse length=719
E-Value8.4E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5017106888395
Replicate 23.1932984885877
Replicate 34.8533516009475
Condition 2: 8 Hour
Replicate 11.1223889640596
Replicate 20.98122143156696
Replicate 30.74792447736777
Condition 3: 24 Hour
Replicate 14.2156792701147
Replicate 25.467147529382
Replicate 35.5311500888413


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_192467.p1 GENE.S_Transcript_192467~~S_Transcript_192467.p1 ORF type:internal len:228 (-),score=51.30,Polyketide_cyc|PF03364.16|8.5e-09 S_Transcript_192467:1-681(-)
CTTGAGCAAGAGGTTAGTTTTGAACAGGTTGAAGGGGACTTTGACTCCTTTTGTGGAAGGTGGCAGCTTGAGCAGCTGGGAAACCATCACACACTGCTAAAATACTCTGTGGAATCAAAAATGCGCCAGGATACCTTTCTGTCAGAAGCTATTACGGAAGAGGTTATATATGAGGATCTTCCATCCAACCTGTGTGCTATCCGGGACTACATTGAGAAGAGGATAGGAACAGATTCCACAGATTCCTCCGAGGTGTATGATCATGAAAATGTGGAGCGGCAGAGTGGTGAAACACACCAAGGGCAGCCTAGCACTTCATCCAGTAAAGGAAGCGATACTGACCCCATTACACTCGCGGAAAATAAATCAAGTGCAAGGAATTCAAGTCTTATAAAACAAAGGCCTAGAGTTCCTGGTTTGCAACAGGATATTGAAGTTCTTAAATCTGAGATACTGTCGTTTATTTCAGAGCATGGGCAGGAAGGTTTTATGCCCATGAGGAAGCAACTTCGTGTTCATGGTAGGGTTGACATTGAGAAGGCAATCAACAGGATGGGTGGGTTTAGAAAAATTGCTTCCCTGATGAATCTCTCTCTTGCTTACAAACATCGAAAACCAAAGGGTTATTGGGATAACCTTGAAAATTTGCAGGAAGAAATTACTCGTTTTCAGAAGAACTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_192467.p1 GENE.S_Transcript_192467~~S_Transcript_192467.p1 ORF type:internal len:228 (-),score=51.30,Polyketide_cyc|PF03364.16|8.5e-09 S_Transcript_192467:1-681(-)
LEQEVSFEQVEGDFDSFCGRWQLEQLGNHHTLLKYSVESKMRQDTFLSEAITEEVIYEDLPSNLCAIRDYIEKRIGTDSTDSSEVYDHENVERQSGETHQGQPSTSSSKGSDTDPITLAENKSSARNSSLIKQRPRVPGLQQDIEVLKSEILSFISEHGQEGFMPMRKQLRVHGRVDIEKAINRMGGFRKIASLMNLSLAYKHRKPKGYWDNLENLQEEITRFQKNW

Click here to download the sequence:
Link to NCBI Protein BLAST