Transcript Information: S_Transcript_192469.p1


Annotated TAIR IDAT5G08720.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2841536-2845335 | Reverse length=719
E-Value8E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9009286596557
Replicate 21.9698919247781
Replicate 32.9640111562929
Condition 2: 8 Hour
Replicate 10
Replicate 20.59924594570696
Replicate 30.57096020370486
Condition 3: 24 Hour
Replicate 12.1454796285405
Replicate 23.6423982890558
Replicate 34.2787396758679


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_192469.p1 GENE.S_Transcript_192469~~S_Transcript_192469.p1 ORF type:internal len:112 (+),score=25.68 S_Transcript_192469:2-334(+)
TATGAGGATCTTCCATCCAACCTGTGTGCTATCCGGGACTACATTGAGAAGAGGATAGGAACAGATTCCTCTGAGGTGTATGATCAAGAAAATGTGGAGCGGCTCAGTGGTGAAACACAGCAAGAGCAGCCTAGCACTTCATCCAGTAAAGGAAGTGATACTGACCCCATTACACTCACGGAAAATAAAACAAGCGCAAGGGCTTCAATTCTTATAAAACAAAGGCCAAGAGTTCCTGGTTTGCAACAGGATATTGAAGTTCTTAAATCTGAGATACTGTCGTTTATTTCAGAGCATGGGCAGGAAGGTTTTATGCCCATGAGGAAGCAACTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_192469.p1 GENE.S_Transcript_192469~~S_Transcript_192469.p1 ORF type:internal len:112 (+),score=25.68 S_Transcript_192469:2-334(+)
YEDLPSNLCAIRDYIEKRIGTDSSEVYDQENVERLSGETQQEQPSTSSSKGSDTDPITLTENKTSARASILIKQRPRVPGLQQDIEVLKSEILSFISEHGQEGFMPMRKQL

Click here to download the sequence:
Link to NCBI Protein BLAST