Transcript Information: S_Transcript_192540.p2


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16674812803998
Replicate 20.82942817885394
Replicate 30.6008911505935
Condition 2: 8 Hour
Replicate 11.0422183237697
Replicate 21.1774657178804
Replicate 30.85477083127745
Condition 3: 24 Hour
Replicate 11.0676070878862
Replicate 21.1076298890696
Replicate 30.82177087034213


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_192540.p2 GENE.S_Transcript_192540~~S_Transcript_192540.p2 ORF type:complete len:798 (+),score=138.44,Retrotrans_gag|PF03732.13|1.2e-19,Retrotrans_gag|PF03732.13|4.3e+03,gag-asp_proteas|PF13975.2|7.9e+03,gag-asp_proteas|PF13975.2|5.5e-12,Asp_protease_2|PF13650.2|3.4e-06 S_Transcript_192540:243-2636(+)
ATGCCAAGAACTAGGGAAGGTAAGGGTGTCTCACTCGATTCCATTCTATCCGGCCCTATTCCGAAAGGCAAAAGAAGTCAAGCAAGGAAAGCCAGCGAATCTACAAGAATGGCAGAGCAACCGCCACCACCACAACAACGCACATTGAGAGATTATGTGTCGCCACAATCACAAAATGTGGGTTCGAGTATTCTAAGACCTAACATCCAAGCCACAAACTTCGAGTTGAAGCCTGCTCTTATTCGAATGGTGCAACAAAGCCAATTCTCGGGGTTTCTAAATGAAGATCCTAACCTTCATTTAGGGGTTTTCCTTGAATATTGTAACACCATCAAACAAGAGGGGGTCACACAAGATAACATCAGGCTGTGGTTGTTTCCATTTTCTTTGAGTGGAAGAGCAAGGTCATGGCTACAATCTTTGCCACGCGACTCCATTACGACATGGGAAGAGTTATGTCAAGCATTTTTATCCAAATACTTCCCACCTTACAAGGCGGATGAGTTGCGAGGGCAAATTCAAAACTTTACTCAAAAAGATGGGGAATCATATTATGAAGCATGGGAGAGATACAAAGAACTCCAACGGATGTGCCCACACCATGGTCTTGAGAAATGGCTCATTGTGCACTCCTTCTATAAAGGGCTCTTTCCCAACACCAGGATGAATGTAGATGCACATGCCGGAGGTGGAATCATGAACAAGCCATTAGATGAAGTACTTCAACTTTTTGAAGAGATTTCTCAAAATTATGGCATGTTTACAAATGAGCGAGCTCCGAAAAAGGTAACCTCTGGTAAGCATGAAATTGATGTCATTGATCATTTAACTTCCAAAGTTGATGCTTTATTTAGTAAGCTTGATAAGATGACTATTAATGCATGCAATTCATCCAATGCTCATTGTGAAATTTGTGGTATTGATGGACATGATGCTTCTTCATGCCAAATGAACCCTCCCCCTACTCTTGAAGCTTGCATGGAACATGTGAACTATCTAAACAACTATGCCCCTAGGAATGACCCCTTCTCAAATACCTATAATCCGGGTTGGAAGAATCATCCGAACCTTTCTTATAGGAACCCCACTCATAACCAAAGTCCACAACAACCGCCAGGTTTTTATGCCCCTAGGAATCCCAATCCACAACCCATGCATCCTCCGCAAAGGAATGATCTAAGAGAACTAGTTGAGAAATTTGTAGTGGCCCAAAAGAAGCAAAATGAAGAGTTTGTTGATGTCATAAAACAACTAGCCTCTAAGGTAGACAATCTAGCTACCCATAACAAGATGCTAGAAACACAAATTGCACAACAAGCTAGCTCTTCGTTTAGACCCACCGGTGTGCTCCCAGGCCAACCTGAACCAAATCCTAAGGAGCATTGTAAGGCCATTACATTGAGGAGTGGAAAAGGGTATGAGGGCCCTAGGATGGAAGAGAATGAGAGGGAAAAAGAGAGTGAGGAGGATGACCTTGTGACACAAGAAGAGGGTGACAAAGAAAAGAGTGAAGAAAAGAAGGAAGAAGGAAAAGAGAAGTATGTGCCTCCGGAACCATATAAGTCACCCTTGCCTTTTCCTCAAAGGTTGGCTAAGTCCAAAAATGAGAAGCAATTTGGTAAGTTCATGGAAATTCTTAAGAAATTGCACATAAGTGTTCCATTTGTTGATGCTATCTCTCAAATGCCTTCTTATGCTAAATTTTTGAAAGAGATCTTGTCTAACAAAAGAAAGCTTGAAGATTATGAAACTGTGGCTCTAACGGAAGAATGTAGTGCAATTATTCAAAATAAATTGCCAACTAAACTGAAGGACCCTGGTTCATTTTCTATTCCATGTGTGATTGGCGATGTTGCTATTAACCGTGCTTTATGTGATTTGGGAGCAAGTGTAAGCTTGATGCCCTTATCAATTTGCAAGAAACTCAAGATGGGTGATCTCAAACCCACAACCATATCACTACAATTGGCGGATAGATCGGTAAAATACCCGGTAGGTATATTAGAGGATGTACCTATCAAGGTTGGTAAGTTTTTCATTCCCGCTGATTTTGTGATTCTTGACATGGAGGAAGACTCTCAAATCCCCATCATTTTAGGAAGGCCATTTTTAGCCACCGCTGGAGCGGTGATTGATGTTAGAAATGGAAGGCTTTCTTTAAATGTAGGGGACGAGAAAGTTGAATTCGAACTATCTAATGCCATGAGTTTTTCTGTTGATGATTCTTGTTACAGGATTGACACCATTGACAGGATCCTAAGAGAGGATTTTCCAAGACACACCTCCAAAGATCCCTTAGAGATGTGTCTAGTGAAAGATGGTGGAATGATTGAAGATGGGAAAGAAGAGGCATTGTACTCAAAGTTTCTAGATGAAAACTCTTCTATCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_192540.p2 GENE.S_Transcript_192540~~S_Transcript_192540.p2 ORF type:complete len:798 (+),score=138.44,Retrotrans_gag|PF03732.13|1.2e-19,Retrotrans_gag|PF03732.13|4.3e+03,gag-asp_proteas|PF13975.2|7.9e+03,gag-asp_proteas|PF13975.2|5.5e-12,Asp_protease_2|PF13650.2|3.4e-06 S_Transcript_192540:243-2636(+)
MPRTREGKGVSLDSILSGPIPKGKRSQARKASESTRMAEQPPPPQQRTLRDYVSPQSQNVGSSILRPNIQATNFELKPALIRMVQQSQFSGFLNEDPNLHLGVFLEYCNTIKQEGVTQDNIRLWLFPFSLSGRARSWLQSLPRDSITTWEELCQAFLSKYFPPYKADELRGQIQNFTQKDGESYYEAWERYKELQRMCPHHGLEKWLIVHSFYKGLFPNTRMNVDAHAGGGIMNKPLDEVLQLFEEISQNYGMFTNERAPKKVTSGKHEIDVIDHLTSKVDALFSKLDKMTINACNSSNAHCEICGIDGHDASSCQMNPPPTLEACMEHVNYLNNYAPRNDPFSNTYNPGWKNHPNLSYRNPTHNQSPQQPPGFYAPRNPNPQPMHPPQRNDLRELVEKFVVAQKKQNEEFVDVIKQLASKVDNLATHNKMLETQIAQQASSSFRPTGVLPGQPEPNPKEHCKAITLRSGKGYEGPRMEENEREKESEEDDLVTQEEGDKEKSEEKKEEGKEKYVPPEPYKSPLPFPQRLAKSKNEKQFGKFMEILKKLHISVPFVDAISQMPSYAKFLKEILSNKRKLEDYETVALTEECSAIIQNKLPTKLKDPGSFSIPCVIGDVAINRALCDLGASVSLMPLSICKKLKMGDLKPTTISLQLADRSVKYPVGILEDVPIKVGKFFIPADFVILDMEEDSQIPIILGRPFLATAGAVIDVRNGRLSLNVGDEKVEFELSNAMSFSVDDSCYRIDTIDRILREDFPRHTSKDPLEMCLVKDGGMIEDGKEEALYSKFLDENSSIH*

Click here to download the sequence:
Link to NCBI Protein BLAST