Transcript Information: S_Transcript_192618.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value1.9E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3532034526363
Replicate 23.3655102714853
Replicate 31.5629437358984
Condition 2: 8 Hour
Replicate 10.36144729351073
Replicate 21.1375516257488
Replicate 32.3483560920742
Condition 3: 24 Hour
Replicate 10.92563065638111
Replicate 22.8809929969933
Replicate 31.2824768341585


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_192618.p1 GENE.S_Transcript_192618~~S_Transcript_192618.p1 ORF type:5prime_partial len:118 (+),score=21.67,RPE65|PF03055.11|2.8e-21 S_Transcript_192618:1-354(+)
AGCGGAGTTGTGAAGGTGGATGTATCGGCTGCCCAAGTAGACAACAGAGAGTGCATAGTAGCGAGCCGGATGTATGGAGCAAGGTGCTATGGAGGTGAGCCGTATTTCGTCGCGAGGGAACCAGATGATCTTGATGCTGAGGAAGATGATGGGTGCCTTGTGTCATATATCCATGATGAGGAGACGGATGAATCCATGTTCATTGTCATGGATGCCAAGACAAATGATCTTGATATCGTTGCCTCCGTGAAGCTACCCCAACGGGTACCCTATGGGTTACATGGATTGTTTGTAAAGGACAAGGATCTTAAATTATTGTGGGATGCAAACATGTATTCCACTGTCTCAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_192618.p1 GENE.S_Transcript_192618~~S_Transcript_192618.p1 ORF type:5prime_partial len:118 (+),score=21.67,RPE65|PF03055.11|2.8e-21 S_Transcript_192618:1-354(+)
SGVVKVDVSAAQVDNRECIVASRMYGARCYGGEPYFVAREPDDLDAEEDDGCLVSYIHDEETDESMFIVMDAKTNDLDIVASVKLPQRVPYGLHGLFVKDKDLKLLWDANMYSTVSK*

Click here to download the sequence:
Link to NCBI Protein BLAST