Transcript Information: S_Transcript_192622.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value5.4E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.228809048895
Replicate 236.582745078272
Replicate 324.747945001071
Condition 2: 8 Hour
Replicate 11.8226829330883
Replicate 21.2428804799848
Replicate 31.2753071216656
Condition 3: 24 Hour
Replicate 157.039418003218
Replicate 238.935266041417
Replicate 348.5039315483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_192622.p1 GENE.S_Transcript_192622~~S_Transcript_192622.p1 ORF type:5prime_partial len:234 (+),score=51.71,RPE65|PF03055.11|2.2e-43 S_Transcript_192622:2-703(+)
CCGGTGGCTTTTGACCCTACAAAGGTGTCAAGAATCGGAGTCCTCCCAAGGTATGCCACTGATGAGAAGGACATGAGGTGGTTTGAATTGCCGGGGTTCAATATACTCCATGCCTTCAATGCATGGGATGAAGTGGACGAGAATGGAAACTGCTTCATCATCATGATGGCTTCCAACATATTATCTCCTGAGCATATATTAGATCGAATGGATCTTGCCCATGGATTGGTGGAGAAGGTGAAAATCAATCTAAAGACTGGGCTGGTCTCAAGGCAGCCATTGTCGACAAGAAACTTGGACTTTGGAGTCATTAATCCAGCGTATGTAGGGAAGAAGAGCAAGTATATGTATGCAGCAATTGGTGATCCAATGCCTAACATAACTGGGGTTGTAAAGTTGGATATGTCAGCAGCCAAAGACCAGAGAGAGTGCGTTGTGGCAAGTCGGATGTATGGACCAGGGTGCTATGGGGGCGAGCCATTTTTTGTGGCAAGGCATCCTGATAATCCTTATGCTGAAGAGGATGACGGGTACCTTGTGTGCTATGTCCATGATGAAAATGCAGGGGAATCAAGCTTCATTGTAATGGATGCAAAGTCACCTTGTCTTGATGTTGTTGCTTCCGTGAAGCTACCCCACCGTGTTCCCTATGGATTTCATGGACTGTTTGTGAGGGATAAGCATCTGAAAAACATGATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_192622.p1 GENE.S_Transcript_192622~~S_Transcript_192622.p1 ORF type:5prime_partial len:234 (+),score=51.71,RPE65|PF03055.11|2.2e-43 S_Transcript_192622:2-703(+)
PVAFDPTKVSRIGVLPRYATDEKDMRWFELPGFNILHAFNAWDEVDENGNCFIIMMASNILSPEHILDRMDLAHGLVEKVKINLKTGLVSRQPLSTRNLDFGVINPAYVGKKSKYMYAAIGDPMPNITGVVKLDMSAAKDQRECVVASRMYGPGCYGGEPFFVARHPDNPYAEEDDGYLVCYVHDENAGESSFIVMDAKSPCLDVVASVKLPHRVPYGFHGLFVRDKHLKNMM*

Click here to download the sequence:
Link to NCBI Protein BLAST