Transcript Information: S_Transcript_192772.p1


Annotated TAIR IDAT2G20840.1
Annotated Gene NameSecretory carrier membrane protein (SCAMP) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8971925-8974400 | Reverse length=282
E-Value4.8E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8823522501973
Replicate 210.276804256432
Replicate 311.173774956188
Condition 2: 8 Hour
Replicate 18.8219041377065
Replicate 29.1090588923968
Replicate 37.7764655757587
Condition 3: 24 Hour
Replicate 111.384955565131
Replicate 212.180875928656
Replicate 37.0654586932898


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_192772.p1 GENE.S_Transcript_192772~~S_Transcript_192772.p1 ORF type:complete len:307 (+),score=72.87,SCAMP|PF04144.9|2.1e-52 S_Transcript_192772:180-1100(+)
ATGGCTTATGATAGCAGTCCTATTGAAGAAGATGTCAATCCTTTCGCTGACCAAACATTTAAACACAAAGGATCAGGAAAATCAAACTTCAGTGGGGGTGCTTTTTACATGCCAAATCCTGGAAGTGTTTCTCCAGCTCCAAACTCTGTAATCTCCCCACTTCCACCAGAACGTGTTGACTATGATCGTGGTGCAACTGTTGACATCCCTCTTGATAATGGAATGACGGATTTGAAGAAGAAAGAAAAGGAGCTTCAAGCTAAAGAAGCTGAATTGAGGAAGAAAGAACAGGAACTAAAAAGGAGGGAAGATGCTATTGCTCGAGCTGGTGTTGTGATAGAAGAGAAAAATTGGCCACCCTTTTTCCCTATCATTCACCATGACATTCCAAACGAGATACCACTTCATTTGCAGAAGTTGCAGTATGTTGCTTTCACTTCTTTCCTTGGAATTGCGCTATGCCTTTTCTGGAATATCATTGTAGTGACCATTGCTTGGTTGAAAGGCGAGGGAGTGAAAATTTGGCTTTTATCTATCATCTATTTCATATCTGGAGCACCAGGAGCTTATGTTTTCTGGTATCGTCCACTATATCGTGCTATGAGGACCGATAGCGCTCTAAAATTTGGGTGGTTCTTCATTGCATATTCTGTTCACATTGGCTTTTGTGTTTTGGCTGCAATTGCTCCACCAATTGTCTTTGAGGGAAAATCTCTCACGGGAATCCTGCCAGCTATAGATGTATTGAGCGGTAATGTTATACTTGGGATCTTATACCTTGTTGGATTTGGATTTTTTGTCCTTGAATCATTGCTTAGCATTTGGGTTATTCAGCAAGTTTATGCATATTTTCGAGGAAGTGGTAAAGCAGCAGATTTGCAGCAGCAGGCAGCAAGACAGACAATGATGGCAGCATTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_192772.p1 GENE.S_Transcript_192772~~S_Transcript_192772.p1 ORF type:complete len:307 (+),score=72.87,SCAMP|PF04144.9|2.1e-52 S_Transcript_192772:180-1100(+)
MAYDSSPIEEDVNPFADQTFKHKGSGKSNFSGGAFYMPNPGSVSPAPNSVISPLPPERVDYDRGATVDIPLDNGMTDLKKKEKELQAKEAELRKKEQELKRREDAIARAGVVIEEKNWPPFFPIIHHDIPNEIPLHLQKLQYVAFTSFLGIALCLFWNIIVVTIAWLKGEGVKIWLLSIIYFISGAPGAYVFWYRPLYRAMRTDSALKFGWFFIAYSVHIGFCVLAAIAPPIVFEGKSLTGILPAIDVLSGNVILGILYLVGFGFFVLESLLSIWVIQQVYAYFRGSGKAADLQQQAARQTMMAAL*

Click here to download the sequence:
Link to NCBI Protein BLAST