Transcript Information: S_Transcript_19279.p1


Annotated TAIR IDAT5G62790.2
Annotated Gene Name1-deoxy-D-xylulose 5-phosphate reductoisomerase
Annotated Gene Symbol(s)DXR
Annotation TypeOrtholog
Chromosome Positionchr5:25214358-25217289 | Reverse length=497
E-Value3.9E-273
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 172.718064599529
Replicate 277.094690948141
Replicate 376.071058811949
Condition 2: 8 Hour
Replicate 144.536699505849
Replicate 246.772889899837
Replicate 349.640307234276
Condition 3: 24 Hour
Replicate 172.618138769186
Replicate 268.402569632921
Replicate 374.979819081876


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19279.p1 GENE.S_Transcript_19279~~S_Transcript_19279.p1 ORF type:5prime_partial len:441 (+),score=93.92,DXP_reductoisom|PF02670.12|2.5e-48,DXP_reductoisom|PF02670.12|1.5e+04,DXP_redisom_C|PF08436.8|2.4e-40,DXPR_C|PF13288.2|1.5e-38 S_Transcript_19279:2-1324(+)
GGATTCTCTTGGAGAAGAAAGGATTGCACACAAACTTTTGGCGGGATCCGTTGTTCAGCTCAGCCACCACCTCCTGCCTGGCCTGGAAGAGCTGTGATCGATCGTGATTATAAGTCTTTGGATGGTCCAAAGCCTATTTCTATCATTGGATCTACTGGTTCTATTGGTACTCAGACTCTAGATATAGTTTCCGAGAATCCAGACAAGTTCAGAGTTGTAGCTCTTGCAGCTGGTACAAATGTGACTCTTCTTGCTGATCAGATCAGGAGATATAAACCTGAATTGGTTTCAGTTAAAAATGAGTCCTTGGCTAGCGAACTTCAAGAAGCACTTGCTGATGCTGAGCACAAGCCTCAAATTATTCCAGGAGAGGAGGGCATAGTTGAGGTAGCACGCCACCCAGATGCTGTTACAGTAGTTACAGGAATAGTCGGTTGTGCAGGGCTAAAGCCTACAGTCGCTGCCATTGAAGCAGGCAAAGACATAGCCTTAGCCAATAAGGAGACCCTCATTGCCGGTGGTCCTTTTGTTCTTCCCCTTGCACACAAGCATAATGTTAAGATTCTTCCAGCTGATTCCGAACATTCTGCAATCTTTCAGTGTATTCAAGGCTTGCCAGAGGGAGCTCTTAGACGCGTTATTTTGACTGCATCTGGTGGAGCTTTCAGGGATTGGCCTGTTGAAAAACTAAAAGAAGTCAAAGTAGCTGATGCTTTGAAGCATCCTAACTGGAGCATGGGGAAGAAGATTACAGTAGATTCTGCAACCTTGTTTAACAAGGGCCTAGAAGTTATTGAAGCCCATTACTTATTCGGAGCTGGATATGATGACATTGATATTGTAATTCATCCACAGTCGATAATCCATTCAATGATTGAAACACAGGATTCATCTGTTATTGCTCAGTTGGGGTGGCCTGATATGCGATTGCCTATCCTATACACACTGTCATGGCCAGACAGAGTATACTGTTCTGAAGTAACTTGGCCACGTCTTGATCTCTGCAAGCTTGGATCACTTACATTCAAAGCTCCTGACAACAAGAAGTACCCATCTATGAATCTCGCTTATGCTGCAGGACGTGCTGGCGGCACTATGACTGGTGTCCTTAGTGCAGCTAATGAGAAGGCAGTTGAGATGTTCCTAGATGAGAAGATAAGCTACCTAGATATCTTCAGGGTTGTGGAGCTGACCTGTGATAAACATCAGGACGAGTTGGTAAAATCACCCTCCTTGGAAGAAATTGTGCATTACGACCTCTGGGCTCGGGATTATGCTGCCAGTTTACAGCCTGCTTCTGGTTTGAGTCCTGTACCCGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19279.p1 GENE.S_Transcript_19279~~S_Transcript_19279.p1 ORF type:5prime_partial len:441 (+),score=93.92,DXP_reductoisom|PF02670.12|2.5e-48,DXP_reductoisom|PF02670.12|1.5e+04,DXP_redisom_C|PF08436.8|2.4e-40,DXPR_C|PF13288.2|1.5e-38 S_Transcript_19279:2-1324(+)
GFSWRRKDCTQTFGGIRCSAQPPPPAWPGRAVIDRDYKSLDGPKPISIIGSTGSIGTQTLDIVSENPDKFRVVALAAGTNVTLLADQIRRYKPELVSVKNESLASELQEALADAEHKPQIIPGEEGIVEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRVILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAGYDDIDIVIHPQSIIHSMIETQDSSVIAQLGWPDMRLPILYTLSWPDRVYCSEVTWPRLDLCKLGSLTFKAPDNKKYPSMNLAYAAGRAGGTMTGVLSAANEKAVEMFLDEKISYLDIFRVVELTCDKHQDELVKSPSLEEIVHYDLWARDYAASLQPASGLSPVPV*

Click here to download the sequence:
Link to NCBI Protein BLAST