Transcript Information: S_Transcript_192835.p1


Annotated TAIR IDAT5G58330.1
Annotated Gene Namelactate/malate dehydrogenase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23580010-23582287 | Reverse length=443
E-Value5.3E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.781967016396
Replicate 252.691132707947
Replicate 359.66767556459
Condition 2: 8 Hour
Replicate 140.76912854746
Replicate 245.664891046971
Replicate 346.267928036695
Condition 3: 24 Hour
Replicate 166.948142932939
Replicate 267.858118190358
Replicate 365.577315453302


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_192835.p1 GENE.S_Transcript_192835~~S_Transcript_192835.p1 ORF type:5prime_partial len:170 (-),score=37.32,Ldh_1_N|PF00056.19|2.6e-24 S_Transcript_192835:376-885(-)
GGTGGTGTTCGTTGCTCTGTAGCTCCAAACCAAGTTCAGACAGCTGTTCCTGCTCCTCCCACTGAAGTGCAGAGCGGCAAGAATGAATGCTATGGAGTCTTTTGCTTGACTTATGATTTGAAAGCTGAAGAAGAGACGAGATCATGGAAGAAGTTGATCAAAATCGCAGTTTCTGGTGCTGCTGGGATGATATCAAACCATCTGTTATTCAAACTTGCGGCTGGCGAGGTATTTGGACAAAATCAGCCAATTGCTTTGAAGTTGCTGGGATCTGAACGTTCATTCCAAGCCCTTGAAGGAGTAGCTATGGAACTCGAGGATTCACTATTTCCTCTGTTGCGGGAAGTTAGTATTGGTATAGATCCTTATGAGGTATTTGAAGATGCAGAATGGGCCCTTCTAATTGGAGCGAAACCTCGTGGGCCTGGCATGGAACGAGCTGACTTATTAGACTTAAACGGACAGATATTTGCAGAGCAAGTATGGAAGTTTGTGTCTAAATGCGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_192835.p1 GENE.S_Transcript_192835~~S_Transcript_192835.p1 ORF type:5prime_partial len:170 (-),score=37.32,Ldh_1_N|PF00056.19|2.6e-24 S_Transcript_192835:376-885(-)
GGVRCSVAPNQVQTAVPAPPTEVQSGKNECYGVFCLTYDLKAEEETRSWKKLIKIAVSGAAGMISNHLLFKLAAGEVFGQNQPIALKLLGSERSFQALEGVAMELEDSLFPLLREVSIGIDPYEVFEDAEWALLIGAKPRGPGMERADLLDLNGQIFAEQVWKFVSKCV*

Click here to download the sequence:
Link to NCBI Protein BLAST