Transcript Information: S_Transcript_193043.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.10167184127887
Replicate 30.16997913441106
Condition 2: 8 Hour
Replicate 10
Replicate 20.10309607668077
Replicate 30
Condition 3: 24 Hour
Replicate 10.10066766585527
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_193043.p2 GENE.S_Transcript_193043~~S_Transcript_193043.p2 ORF type:complete len:217 (-),score=28.16,gag_pre-integrs|PF13976.2|5e-11 S_Transcript_193043:2450-3100(-)
ATGGGTAGCCAGAGTTCCGCAAGCATTGTCGGCATAGGTGATATTCGAGTCCAAACCAGTGTTGGGTGCTATTTGATGTTGAGAGATGTTCGTCATATTCCAGACTTACGCCTCAATTTATTGTCTGCAAATGTCCTTGATCAAGAGGGTTACAAGCATACTTTCGGCGAGGGTAAGTGGAAATTGTCTAAAGGCTCTTCGACTGTTGCTCGTGGCAATCTTTGTTGCACCTTATACAAGACATACTTGAAAGTATGTGCTGGTGAGTTGAATGCAGTTGAAGAGAAAACCTCTCCTAACTTATGGCATCGGAGATTGGGGCATGTCAGCGAGAAAGGGATAAAGTTGCTAGGTGGTAAGTCACTTATTCCTACAGATGTTACTATTTCACTTGATCCTTGTGATCACTGTTTGGCAAGAAAGCAACATAGAGTATCCTTTACGGGGAGATCTACAAGAAAAAAGGTGAAGTTGGAGTTGGTTCACTCCGACGTTTGTGGTCCTATAGAGGTGGAATCACTTGGAGGTAACAAATATTTTGTTACTTTTATTGGTGATGCTACTAGGAGAACGTGGGTTTATATGATGAAGAACAAAAGCTGGTATATTTCAAAATTTTCATGTCATGGTAGAAAGGGAGACAGGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_193043.p2 GENE.S_Transcript_193043~~S_Transcript_193043.p2 ORF type:complete len:217 (-),score=28.16,gag_pre-integrs|PF13976.2|5e-11 S_Transcript_193043:2450-3100(-)
MGSQSSASIVGIGDIRVQTSVGCYLMLRDVRHIPDLRLNLLSANVLDQEGYKHTFGEGKWKLSKGSSTVARGNLCCTLYKTYLKVCAGELNAVEEKTSPNLWHRRLGHVSEKGIKLLGGKSLIPTDVTISLDPCDHCLARKQHRVSFTGRSTRKKVKLELVHSDVCGPIEVESLGGNKYFVTFIGDATRRTWVYMMKNKSWYISKFSCHGRKGDRL*

Click here to download the sequence:
Link to NCBI Protein BLAST