Transcript Information: S_Transcript_193055.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47523216491394
Replicate 21.3789243473447
Replicate 31.6466728646072
Condition 2: 8 Hour
Replicate 13.046484331019
Replicate 22.5967324313968
Replicate 32.6644809506227
Condition 3: 24 Hour
Replicate 13.315741244108
Replicate 22.2259100655341
Replicate 33.6031492007309


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_193055.p1 GENE.S_Transcript_193055~~S_Transcript_193055.p1 ORF type:internal len:112 (+),score=21.56,gag_pre-integrs|PF13976.2|1.3e-07 S_Transcript_193055:3-335(+)
TTGAGAGATGTTCGTCATATTCCAGACTTACGCCTCAATTTATTGTCTGCAAATGTCCTTGATCAAGAGGGTTACAAGCATACTTTCGGCAAGGGTAAGTGGAAATTGTCTAAGAGCTCTTTGAATGTTGCTCGTGGCAATCTTTGTTGCACCTTATACAAGACACACTTGAAGGTATGTGCTGGTGAGTTGAATGCAGTTGAAAAGAAAATCTCTCCTAACTTATGGCACTGGAGATTGGGGCATGTCAGCGAGAAAGGGATAAAGTTGCTAGCTAGTAAGTCACTTCTTATTCCTGCAGATGTTACTATTTCTCTTGATCCCTCCAAGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_193055.p1 GENE.S_Transcript_193055~~S_Transcript_193055.p1 ORF type:internal len:112 (+),score=21.56,gag_pre-integrs|PF13976.2|1.3e-07 S_Transcript_193055:3-335(+)
LRDVRHIPDLRLNLLSANVLDQEGYKHTFGKGKWKLSKSSLNVARGNLCCTLYKTHLKVCAGELNAVEKKISPNLWHWRLGHVSEKGIKLLASKSLLIPADVTISLDPSKK

Click here to download the sequence:
Link to NCBI Protein BLAST