Transcript Information: S_Transcript_193243.p1


Annotated TAIR IDAT4G05390.1
Annotated Gene Nameroot FNR 1
Annotated Gene Symbol(s)ATRFNR1, RFNR1
Annotation TypeOrtholog
Chromosome Positionchr4:2738839-2740483 | Reverse length=378
E-Value1.3E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4068546908465
Replicate 21.6522793941751
Replicate 31.8686472683824
Condition 2: 8 Hour
Replicate 11.7849445639891
Replicate 22.4638599823488
Replicate 32.5353651336321
Condition 3: 24 Hour
Replicate 12.6945230737297
Replicate 21.0982463759464
Replicate 30.11111032777584


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_193243.p1 GENE.S_Transcript_193243~~S_Transcript_193243.p1 ORF type:5prime_partial len:227 (-),score=35.90 S_Transcript_193243:1989-2669(-)
CAGACGTACAATGTAAGCTATGGCAGTAAATCATGGACTCCTGCGTTTACATTGGACTTGAAAACCAAGAGCACCCAACTGAGAAAGCAATCAGTAGTGTGCATGTCTCTGCAACAGGCTGCCACTCCAAAGGTTGCAGTTACACCTATAGAGCTTGAGGATGCTAAAGAACCCCCCCTACATCTATACAAGGCCAAGGAGCCTTACACAGCAACCATTGTCTCTGTTGAGAGGCTTGTGGGCCCTAAGGCTCCAGGAGAGACATGCCATATTGTGATCGATCATGGTGGCAATGTTCCCTACTGGGAAGGACAGAGTTATGGAGTTATACCTCCAGGTGAGAACCCGAAAAAGCCAGGGAATCCCCACAATGTCCGTCTCTATTCCATTGCTTCCACAAGGTATGGAGACAATTTTGATGGAAAGACTGCGAGTTTATGTGTTCGCCGAGCTGTTTATTATGATCCTGAGACGAGTAAGGAGGACCCAACAAAGATGGGTGTATGCAGCAATTTCCTTTGCAATGCAAAACCTGGAGACAAGGTGCAGATAACTGGTAAGTTGCCTCTAGGTTGCAACTCACAAGGCATCTACTTAGCCCGGGATTTTAGTTGTGATACTTTCATTAGATATCATTTGAAGATATCTACCACAAAGAAATTGAGAAATTTGTGGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_193243.p1 GENE.S_Transcript_193243~~S_Transcript_193243.p1 ORF type:5prime_partial len:227 (-),score=35.90 S_Transcript_193243:1989-2669(-)
QTYNVSYGSKSWTPAFTLDLKTKSTQLRKQSVVCMSLQQAATPKVAVTPIELEDAKEPPLHLYKAKEPYTATIVSVERLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDNFDGKTASLCVRRAVYYDPETSKEDPTKMGVCSNFLCNAKPGDKVQITGKLPLGCNSQGIYLARDFSCDTFIRYHLKISTTKKLRNLWY*

Click here to download the sequence:
Link to NCBI Protein BLAST