Transcript Information: S_Transcript_193615.p1


Annotated TAIR IDAT4G17310.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9686466-9686848 | Reverse length=99
E-Value7.4E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0747068036825
Replicate 26.9545749692166
Replicate 36.2144002020828
Condition 2: 8 Hour
Replicate 16.4903361834753
Replicate 27.5383403025166
Replicate 35.5606558969517
Condition 3: 24 Hour
Replicate 10.71233315730198
Replicate 20.9853831120151
Replicate 33.5639845355055


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_193615.p1 GENE.S_Transcript_193615~~S_Transcript_193615.p1 ORF type:3prime_partial len:92 (+),score=8.40 S_Transcript_193615:80-352(+)
ATGGCGTCTCGATGCTGTAGATTCATCAACAGAACATCTCTTTCTTCAATTAAATCCGCATTTAAATCAACTTCTACTCCAACAAGACCTGCTGCTGGTCCTCTTCCCAGATTCACTTCCTCTTCACCACCTGCCCCCAGATTCAACTTCTCCAGGATTCCAACGGAGCTAGGAGGAGTGCAGTCGTTAATGCCGCTCCACAGCGCAGTAGCGGGGGCAAGGATGACGTCATGCCTGAGTACAAAATCAAGGAGCTGTAGAGCTCTCTCTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_193615.p1 GENE.S_Transcript_193615~~S_Transcript_193615.p1 ORF type:3prime_partial len:92 (+),score=8.40 S_Transcript_193615:80-352(+)
MASRCCRFINRTSLSSIKSAFKSTSTPTRPAAGPLPRFTSSSPPAPRFNFSRIPTELGGVQSLMPLHSAVAGARMTSCLSTKSRSCRALSQ

Click here to download the sequence:
Link to NCBI Protein BLAST