Transcript Information: S_Transcript_19366.p1


Annotated TAIR IDAT1G76110.1
Annotated Gene NameHMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28555287-28557465 | Reverse length=338
E-Value3.8E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.528190532511
Replicate 227.013888001524
Replicate 332.311092744891
Condition 2: 8 Hour
Replicate 145.841193358876
Replicate 249.940307790256
Replicate 348.590062060174
Condition 3: 24 Hour
Replicate 130.01521392999
Replicate 230.961978807057
Replicate 334.059689885649


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19366.p1 GENE.S_Transcript_19366~~S_Transcript_19366.p1 ORF type:5prime_partial len:254 (+),score=45.23,HMG_box|PF00505.15|2.1e-12,HMG_box_2|PF09011.6|1.2e+04,HMG_box_2|PF09011.6|3.4e-11,ARID|PF01388.17|1.2e-08,ARID|PF01388.17|1.1e+04 S_Transcript_19366:2-763(+)
GAAGTTACAAGGAGAGGAGGCTATGACAAGGTTGTTTCTGAAAAGAAATGGAGGGAAATAAGTGCAATTTTCAACTTTTCACCAACGACCACAAGTGCTTCCTTTGTGCTAAAAAGGCATTACCATAGTCTGTTATACCAGTATGAGCAGGTGTACTTCTTTAACTTGAAGGGTCCTATTTCTTCAAGTACTCTTGCTCCATTACCCCTTGATTGTTATCATCCATGTGGGCCTGATCATGAGGAATATATTCCCAGAGGGGTCCAAGATTCACCTGCTAGAGTTGTTGTAGGAACAATTAATGGAAAATTTGACTGTGGTTATTTAGTATCTGTTCAACTGGGTGACGATGTTCTTTGTGGAGTAATTTACCATCCAGACGAGCCATCTGTTACTTGTGCGGCTCCAGGTGAAGATCTTAGCATGGCTATAGTCCCCTATGATACGACCTCCAACCACTGTCGATCATCAAGGAGGAGGAGGCGTAAAAGGAAGAGATGGGGAGGAGACCCTAACCATCCGAAACCAAATAGAAGCGGATACAATTTCTTCTTTGCTGAGAAACATTCAGCTCTCAAGTCTCTTTATCCTAACAGAGAAAGAGAGTTCACCAAGATGATTGGGGAGTCTTGGAACAGTCTCAGCCCTGAAGAAAGAGCAGTTTATCAGAATATCGGATTGAGAGACAAGGAACGATACAGGAGGGAACTCAAGGAATACAATGAGAGGCAGGCAGTGCTCAGAGGAGGCAAGGACAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19366.p1 GENE.S_Transcript_19366~~S_Transcript_19366.p1 ORF type:5prime_partial len:254 (+),score=45.23,HMG_box|PF00505.15|2.1e-12,HMG_box_2|PF09011.6|1.2e+04,HMG_box_2|PF09011.6|3.4e-11,ARID|PF01388.17|1.2e-08,ARID|PF01388.17|1.1e+04 S_Transcript_19366:2-763(+)
EVTRRGGYDKVVSEKKWREISAIFNFSPTTTSASFVLKRHYHSLLYQYEQVYFFNLKGPISSSTLAPLPLDCYHPCGPDHEEYIPRGVQDSPARVVVGTINGKFDCGYLVSVQLGDDVLCGVIYHPDEPSVTCAAPGEDLSMAIVPYDTTSNHCRSSRRRRRKRKRWGGDPNHPKPNRSGYNFFFAEKHSALKSLYPNREREFTKMIGESWNSLSPEERAVYQNIGLRDKERYRRELKEYNERQAVLRGGKDK*

Click here to download the sequence:
Link to NCBI Protein BLAST