Transcript Information: S_Transcript_193831.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48095785364784
Replicate 20.1329083708284
Replicate 30.66660491868436
Condition 2: 8 Hour
Replicate 11.2846620672972
Replicate 20.40431051758542
Replicate 30.77045232307162
Condition 3: 24 Hour
Replicate 10.65797841839139
Replicate 20.27305797079937
Replicate 30.91164015922106


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_193831.p1 GENE.S_Transcript_193831~~S_Transcript_193831.p1 ORF type:5prime_partial len:166 (+),score=12.44,zf-RVT|PF13966.2|3.6e-15,zf-RVT|PF13966.2|3.5e+03 S_Transcript_193831:3-500(+)
AAAGCAAAAGTTCCCCTAAAGGTGCGGGGTTTTATTTGGACCTTAGCCCTAGGGAGGATTAATACTAATGATATGTTGCAGAGGCGGATGCCGGGGTGGTGCCTTTCCCCCGATATATGCGTTATGTGTGGCGCTAGTGGGGAGACGGCCGCTCATCTCTTTTTGCATTGTAGAGTTGCACGTTCCTTGTGGGGAAAGCTATTTGGGGTGAAAGGGGAGGTTGCGGTTCTCCCCTCCAGTGTACTGGAGTTCTTACAGGTTCGTTGGGTAGGTTTTGGGGGTAATAAGGAGCTCAAGACCCTCTGGCGGAACGCCGTTCTCGCTGTCTTGTGGGGTATCTGGCTGGAGCGTAATAAGAGGGTGTTCTCCCGGTTGACATTTCACCCTGATTCGATTTGGGAGCATATTGCCTTTTTGGCCTCTTTGTGGTCTAAGGCTGTAGGGGCCTTCAGGAGTTATTCTATCACTGAAGTCCAACATAATTGGGCTTGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_193831.p1 GENE.S_Transcript_193831~~S_Transcript_193831.p1 ORF type:5prime_partial len:166 (+),score=12.44,zf-RVT|PF13966.2|3.6e-15,zf-RVT|PF13966.2|3.5e+03 S_Transcript_193831:3-500(+)
KAKVPLKVRGFIWTLALGRINTNDMLQRRMPGWCLSPDICVMCGASGETAAHLFLHCRVARSLWGKLFGVKGEVAVLPSSVLEFLQVRWVGFGGNKELKTLWRNAVLAVLWGIWLERNKRVFSRLTFHPDSIWEHIAFLASLWSKAVGAFRSYSITEVQHNWACL*

Click here to download the sequence:
Link to NCBI Protein BLAST