Transcript Information: S_Transcript_193853.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7586647621833
Replicate 23.5426023883001
Replicate 33.1487598191513
Condition 2: 8 Hour
Replicate 13.4675431409972
Replicate 22.95563040972
Replicate 33.1627172259423
Condition 3: 24 Hour
Replicate 13.50761340601
Replicate 23.7773019293912
Replicate 33.4859736169673


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_193853.p1 GENE.S_Transcript_193853~~S_Transcript_193853.p1 ORF type:complete len:492 (+),score=84.45,NMD3|PF04981.9|2.6e-24 S_Transcript_193853:164-1639(+)
ATGGCTGGCAGTGGCACCGAAGACGACGTTGATAAAAAGGCGATGAAACTGCGAAAGATTGTTCATAATAAGCCCATGAAGAAGAAATCGACGTCATCGTCGTCGTCCAAGAAGAAGAAGAAGAAGTCACAGGAGGATTTGCTTCCCCAATGTTTTCCTCATCTTGCAACTCTTCATCAGCAATTGAATGAGGATCCATTTGTGAAGAAACTCATGGCCAAACCTCCCCGTGACAAAGACACCCCATCATGCCGTAACTGCGGGGATCCAGGCGACCCATTGTGCTTACTTTGCAGCATTTCTGAAGGAAACCCAACAAGGGGACTACCATGTTTCATTAGTATGTACCAGTGTCCCGATTGCCAGGCCTATTCCCAGTCAACAACTGAAGGTTGGTTTCAAGCTGGTGAAGAATCAAAAGAGCTCCTAGCTTTTCTTCTCCACAAGCTCAAACGCTCTCTGATTAGAGTCAAAGTAGAATTGATTAGCGCTTCACTTTCGCCCAGAGAACCTCATTCTCGGAACCTCGACCTCAGTTTGGCTCTCCTATGGAAGGGTCCACAACAAGAACTCTATCATAGTGTATTGATCCTTGTCAGGGGCAGAACTTGCATGCCTTGCATAGTGAAGGAGCCCGTTGCTGGAACATGGAGCATTGTGGTACAACTTAGGCAGCGTGGCTGCCACAACCTAAGTCGTCTCTACTTGGAAAGATACCTTCTAAGGTTCCCCAATCTAGCTGCTCATAGGGTTAAAACAGTGGATCAGGGTACAGATTTCTTCTTTGTTCAAGAGAAAGAAGCTATAAAGTTCTGCAAGGATCTCTCTAGATACTATCCAATTAAAAGAGAGGAAATTCACAAGATCAACGATAATGAGAGTTGTATCCCAGTTTGGATATGCCCTATATGGAAACATGATCTAGTTCATCTGCCTCCTGATGTCTCTGCCAATGTGGGGAACCTTGGTCCTTTACTGATTTGCACACAGGTGAGGAACAAAATCACTTTATTGGATCCCTTAAGTTTGAGGAAATGCGCTTTAAGTGCTGAAGATTATTGGAACGTACCCTTTGAGCCTCTGATAACTAGTCGGGATCTCATAGAGTTTGTAGTGTTGAATGTGGAGATTATTTTAAAGGGAATGAAGGATTCTTTGGCTGATATAAAAGTTGCTCGAGTATCAGATTTTGGCAATAATGACATGACTTTTTCGGTGAGGAGTCATCTTGGTGAGGCTCTGAAGCCTGGGGACTATGCTCTCGGTTATGACTTGTGTAGAACCAATATCAATGATATGAAACTAGACAAATGCCATGACTTTCAGCAGCTTGATGTGGTTCTGATTAAGAATAAAAATGAGCATCTCCTTAAGGAGGCTAAAATCAAGAAGGATAAAGAGACTGCGAGGGAAGCGGCAAAAAATTGTGAGGTGATGTTCGATTTGTCATTAGATGTTGATCATGTCAAGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_193853.p1 GENE.S_Transcript_193853~~S_Transcript_193853.p1 ORF type:complete len:492 (+),score=84.45,NMD3|PF04981.9|2.6e-24 S_Transcript_193853:164-1639(+)
MAGSGTEDDVDKKAMKLRKIVHNKPMKKKSTSSSSSKKKKKKSQEDLLPQCFPHLATLHQQLNEDPFVKKLMAKPPRDKDTPSCRNCGDPGDPLCLLCSISEGNPTRGLPCFISMYQCPDCQAYSQSTTEGWFQAGEESKELLAFLLHKLKRSLIRVKVELISASLSPREPHSRNLDLSLALLWKGPQQELYHSVLILVRGRTCMPCIVKEPVAGTWSIVVQLRQRGCHNLSRLYLERYLLRFPNLAAHRVKTVDQGTDFFFVQEKEAIKFCKDLSRYYPIKREEIHKINDNESCIPVWICPIWKHDLVHLPPDVSANVGNLGPLLICTQVRNKITLLDPLSLRKCALSAEDYWNVPFEPLITSRDLIEFVVLNVEIILKGMKDSLADIKVARVSDFGNNDMTFSVRSHLGEALKPGDYALGYDLCRTNINDMKLDKCHDFQQLDVVLIKNKNEHLLKEAKIKKDKETAREAAKNCEVMFDLSLDVDHVKK*

Click here to download the sequence:
Link to NCBI Protein BLAST