Transcript Information: S_Transcript_193861.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35963515182676
Replicate 20.44721870724692
Replicate 30.12461308164595
Condition 2: 8 Hour
Replicate 10.28818095023153
Replicate 20.15116113945761
Replicate 30.57610398932382
Condition 3: 24 Hour
Replicate 10.29520112825127
Replicate 20.45940158600704
Replicate 31.0225153137209


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_193861.p1 GENE.S_Transcript_193861~~S_Transcript_193861.p1 ORF type:5prime_partial len:148 (+),score=16.26,zf-RVT|PF13966.2|4.2e-14,zf-RVT|PF13966.2|2.8e+03 S_Transcript_193861:1-444(+)
AATGAAGCTAAAGTGGGATGGTACACTTTGGTATGGACTAGCTTTGCTAGGCCTCGAGCCAAATTTATCACTTGGATGTGTATGAAGCAAAGACTATTAACAAAAGATAGAGTGAAAAAGTGGAATCCAAATTGTGATCAGATATGTGAGCTGTGTAAGAGGAAACAGCAAACAAATAAACACCTAATGGCAGAATGCTCATACAGTCAGGACTTGATTGTACTTCTACAGAGACAATTTAAGAGAGGCTGGAAACCAGCTCAAACATGGCAATGTATACTGAACAGTGGATGTAGCTTGGCAGAGGCAAGAAACCACAAGCGCAATGTGCTAAAACTCTGTCTGCTGAAGTATGCTACGCTATATGGGGAGAGAGGAATCAAAGGCTATTTCATCAGACTGAGAAAACACTTGCCCAAAGGTGTCATGAGATTATGCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_193861.p1 GENE.S_Transcript_193861~~S_Transcript_193861.p1 ORF type:5prime_partial len:148 (+),score=16.26,zf-RVT|PF13966.2|4.2e-14,zf-RVT|PF13966.2|2.8e+03 S_Transcript_193861:1-444(+)
NEAKVGWYTLVWTSFARPRAKFITWMCMKQRLLTKDRVKKWNPNCDQICELCKRKQQTNKHLMAECSYSQDLIVLLQRQFKRGWKPAQTWQCILNSGCSLAEARNHKRNVLKLCLLKYATLYGERGIKGYFIRLRKHLPKGVMRLCL*

Click here to download the sequence:
Link to NCBI Protein BLAST