Transcript Information: S_Transcript_193956.p1


Annotated TAIR IDAT5G64830.1
Annotated Gene Nameprogrammed cell death 2 C-terminal domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25914911-25916512 | Reverse length=380
E-Value3E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4808863111579
Replicate 26.5731108785342
Replicate 35.3512602107857
Condition 2: 8 Hour
Replicate 111.104672159958
Replicate 210.026761177909
Replicate 38.8355844994741
Condition 3: 24 Hour
Replicate 15.2065525417996
Replicate 23.8164449545663
Replicate 34.3779196247222


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_193956.p1 GENE.S_Transcript_193956~~S_Transcript_193956.p1 ORF type:complete len:386 (+),score=83.62,PDCD2_C|PF04194.9|7.6e+02,PDCD2_C|PF04194.9|1.3e-34 S_Transcript_193956:708-1865(+)
ATGCGGGAGTTGATTCTTGGCTTGCCTGGACCATGGGCTGATGATAATAAAGAGGCTTCTGATCATTATACAACTAAAATTGGTGGTCTTCCTGACTGGCCTTTCTCTGAGATGTCCTTAGGATCTGATCTGCTTCAATGCAGTTCCTGTAGAAGTAATCTCTGTCTCATTTCACAGGTATATGCCCCTATTTCAAGTGCCACAGTGAAGATTGAAGAACGGATAATTTACATTTTCGGTTGTACAAATGCACAATGTGGGAGCTGGCATGCTATTCGTGTTCAGAAACCTGACAGCTGCGAAGAATTGAAAACTTCAAAATCAGAAGTGGCCTCTTCAACTATTTCATCTGCTTCAGCTTCAGACACTAAGTTTTGGGATGATCTATACTCATTTGAGTCTGAAGGGGAGGGTTGTGGAGATAACGAAGACATGAGCATGGAGGAACTGAGCAGGGCCCTCTCAGAAGCTGGGAGTCTTGCTTCTGGTCCAGTAAAACAAGATGTTAAGAAGCATACTCAGAGTAATGGGGATCCTCTTTCATTGAACCCAAAAACTAGAGAAGTTGATTCCAGTGTTTTTGTGCTCCCCTGTTTCTATGTATATTGCCAGGAGGATAGATCCTCATCCTCAGATTTGGCATCTATTTGCTCGAATTATTCTTCGCTGTCAATTAAGGAGACCCAAGTTAATAGAGATAATGATGATAAGGTACAGGAAGAAGCCTGGGAAGAGGAAGGTTACGAGTATGATAAAGCTTTGAATGCCGATAGGACTTACCTGAAATTCAAGAAAAGAGTCGATTCATGCCCGGAGCAGTGTTTCAGGTACTCTCTTGGAGGAAAGCCTCTGTTAGCTACTGGACAAATGGGTGACCCTGGAAGATGCAGCCTTTGTGGTGAATCAAGGCAGTTCGAAATGCAACTGATGCCTCCATTAGTTTATTTCCTACAGGAAGAAGCTACTGGTGGGCAGAAAGAATTACTGGAGAACTGGTGTTGGATGACCCTAATAATATATACTTGTTCAAAGAGCTGCTTTCAGAAGGAAAATGAAGAAAGGCCAAATCTGCATGGTTGGACTGTTATAGAGGAAACTGTTCTAGCACAATTTGAGAAGCCTTTGACAGAGTCCTCTCGAGTAGGTTATTTCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_193956.p1 GENE.S_Transcript_193956~~S_Transcript_193956.p1 ORF type:complete len:386 (+),score=83.62,PDCD2_C|PF04194.9|7.6e+02,PDCD2_C|PF04194.9|1.3e-34 S_Transcript_193956:708-1865(+)
MRELILGLPGPWADDNKEASDHYTTKIGGLPDWPFSEMSLGSDLLQCSSCRSNLCLISQVYAPISSATVKIEERIIYIFGCTNAQCGSWHAIRVQKPDSCEELKTSKSEVASSTISSASASDTKFWDDLYSFESEGEGCGDNEDMSMEELSRALSEAGSLASGPVKQDVKKHTQSNGDPLSLNPKTREVDSSVFVLPCFYVYCQEDRSSSSDLASICSNYSSLSIKETQVNRDNDDKVQEEAWEEEGYEYDKALNADRTYLKFKKRVDSCPEQCFRYSLGGKPLLATGQMGDPGRCSLCGESRQFEMQLMPPLVYFLQEEATGGQKELLENWCWMTLIIYTCSKSCFQKENEERPNLHGWTVIEETVLAQFEKPLTESSRVGYFS*

Click here to download the sequence:
Link to NCBI Protein BLAST