Transcript Information: S_Transcript_194189.p1


Annotated TAIR IDAT5G06210.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1878497-1879515 | Forward length=146
E-Value3.2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6461650248565
Replicate 20.90980575494906
Replicate 31.7111816984784
Condition 2: 8 Hour
Replicate 13.2977407706907
Replicate 21.6144633038978
Replicate 31.0987550311846
Condition 3: 24 Hour
Replicate 11.1260249221956
Replicate 20
Replicate 30.52004215268281


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194189.p1 GENE.S_Transcript_194189~~S_Transcript_194189.p1 ORF type:5prime_partial len:97 (+),score=18.85,RRM_1|PF00076.18|2e-22,RRM_6|PF14259.2|1.6e-12,RRM_5|PF13893.2|5.2e-08 S_Transcript_194189:2-292(+)
ATCCCTAATTTGATCCTCCCTTCCTCTCTCATTTCTCACAGAGTCATCGCTTCCAAACTCTTTGTTGGAGGACTTTCATTTTATACAACAGAGAAGACACTAGCAGAAGCTTTCTCACAGTATGGGCAAGTTGTAGAAGCTAAAATTATACATGACCGTCTCTCTGACAGATCCAAAGGATTCGGGTTTGTAACTTTTGCTTCAGAAGATGAAGCTGATAAAGCCTTGGCAGAATTGAATGGAAAAGTATGTATAGCTAGCTCAGCCTTTTCCTGCACACATTCAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194189.p1 GENE.S_Transcript_194189~~S_Transcript_194189.p1 ORF type:5prime_partial len:97 (+),score=18.85,RRM_1|PF00076.18|2e-22,RRM_6|PF14259.2|1.6e-12,RRM_5|PF13893.2|5.2e-08 S_Transcript_194189:2-292(+)
IPNLILPSSLISHRVIASKLFVGGLSFYTTEKTLAEAFSQYGQVVEAKIIHDRLSDRSKGFGFVTFASEDEADKALAELNGKVCIASSAFSCTHSM*

Click here to download the sequence:
Link to NCBI Protein BLAST