Transcript Information: S_Transcript_194193.p1


Annotated TAIR IDAT5G06210.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1878497-1879515 | Forward length=146
E-Value3E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4193637486528
Replicate 22.777134349897
Replicate 32.1924931008476
Condition 2: 8 Hour
Replicate 12.6843148650937
Replicate 22.5031439037456
Replicate 34.4718561409052
Condition 3: 24 Hour
Replicate 11.069329961078
Replicate 23.0112756639902
Replicate 31.0582675974175


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194193.p1 GENE.S_Transcript_194193~~S_Transcript_194193.p1 ORF type:complete len:143 (-),score=24.85,RRM_1|PF00076.18|2.5e-24,RRM_6|PF14259.2|1.5e-13,RRM_5|PF13893.2|1.8e-11 S_Transcript_194193:215-643(-)
ATGGCGGCACTCATACGAAGATTCACTAAGAGTAGTTGTTTTTCTACTTCTGTTTCTAGCTCCTTCATCAATACTCATACTTTAATCCCTAATTTGATCCTCCCTTCCTCTCTCATTTCTCACAGAGTCATCGCTTCCAAACTCTTTGTTGGAGGACTTTCATTTTATACAACAGAGAAGACACTAGCAGAAGCTTTCTCACAGTATGGGCAAGTTGTAGAAGCTAAAATTATACATGACCGTCTCTCTGACAGATCCAAAGGATTCGGGTTTGTAACTTTTGCTTCAGAAGATGAAGCTGATAAAGCCTTGGCAGAATTGAATGGAAAATCATTACATGGACGTGTTATATATGTCGACCATGCAAAGCCAAAGATTGACTGGGGCAACGAAATGCCAATAGCAAGAGGACCTCCTGACGACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194193.p1 GENE.S_Transcript_194193~~S_Transcript_194193.p1 ORF type:complete len:143 (-),score=24.85,RRM_1|PF00076.18|2.5e-24,RRM_6|PF14259.2|1.5e-13,RRM_5|PF13893.2|1.8e-11 S_Transcript_194193:215-643(-)
MAALIRRFTKSSCFSTSVSSSFINTHTLIPNLILPSSLISHRVIASKLFVGGLSFYTTEKTLAEAFSQYGQVVEAKIIHDRLSDRSKGFGFVTFASEDEADKALAELNGKSLHGRVIYVDHAKPKIDWGNEMPIARGPPDDK*

Click here to download the sequence:
Link to NCBI Protein BLAST