Transcript Information: S_Transcript_19428.p1


Annotated TAIR IDAT5G27930.1
Annotated Gene NameProtein phosphatase 2C family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9958199-9960219 | Reverse length=373
E-Value1E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 152.576904879259
Replicate 260.269083669309
Replicate 370.672164829841
Condition 2: 8 Hour
Replicate 125.024103000863
Replicate 230.677927944991
Replicate 327.843464893228
Condition 3: 24 Hour
Replicate 155.944213817375
Replicate 253.926359252122
Replicate 353.861710003337


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19428.p1 GENE.S_Transcript_19428~~S_Transcript_19428.p1 ORF type:complete len:369 (+),score=82.44,PP2C|PF00481.17|1.1e-38 S_Transcript_19428:631-1737(+)
ATGGTGCAATTTTTTTCCCTGATCGAGGGATTGGCAAGGAATGCTTCATCCAAGACCAAAAATGTTAAGAATGATATGGGAAGGGAAACTGCTAAATTTTTGGCAGAAGAAGCAAAGAAGAATCATCTTATCATGAGATGTCCTGGTGTAATGACTGCAAGATGCAAAAGTATCGCATCACTTTTCTCCAAGAAAGGGGAAAAAGGTATTAATCAGGATAGCTTGATTGTGTGGGAGGAGTTTGGGTGCCAACAAGATATGACCTTTTGTGGAATTTTTGATGGGCATTGTCCCTGGGGTCACTTTGTTTCTAAGTGGATCAGCAAATTGCTGCCATCGTTATTGTTATGTAATTGGCAGAAAATACTTGCTGTTTCTTCTCTTGGAGTAGATCTGGATGAAGAGTTGAGGCAATTGACTAGAGATGCCCAAGAATTTGACATATGGAAGCAGACATATTTGAGAACTTGTGCCACCATTGATCAAGAACTACAACAGCATCCCAGAGTTGACTCCTTTGATAGCGGGACTACTGCTTTGGCAATTGTCAGACAGGGTGAACTTGTCACTGTAGCTAATGTTGGAGATTCTCGGGCTGTCTTGGCTACATTAAATGAAGATGGAAACTTGATACCTGTTCAACTGACTGTTGACTTTAAGCCTGACCTACCTCAGGAAGCAGAAAGGATAGCACTGTCAAGAGGACGAGTATTTTGTTCTCATGATGAACCAGGAGTTTATAGGGTCTGGCAGCCTAATAAGGGGACTCCAGGGCTAGCATTATCACGAGCCTTGGGTGATCATTGCATGAAAGAATTTGGGCTTATTTCTGAGCCTGAAGTGACTCAAAGACACATTACGAATCGTGACCAATTTGCTATATTGGCTACAGATGGGGTGTGGGATGTTGTCTCCAATGAAGAAGCAGTGCAGATTGTATCATCAGCACCATCAAGAGAAAAATCGGCAAAGAGGCTGGTAAAACATGCAGCTCATGCATGGAAATATAAGAGACCTGGTACTGCCATGGATGATATCTCTGCAATCTGCATGTACTTCCACAGTTCTTCACCTTCGAACCAAAGTCAAACTGTGTTTAGAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19428.p1 GENE.S_Transcript_19428~~S_Transcript_19428.p1 ORF type:complete len:369 (+),score=82.44,PP2C|PF00481.17|1.1e-38 S_Transcript_19428:631-1737(+)
MVQFFSLIEGLARNASSKTKNVKNDMGRETAKFLAEEAKKNHLIMRCPGVMTARCKSIASLFSKKGEKGINQDSLIVWEEFGCQQDMTFCGIFDGHCPWGHFVSKWISKLLPSLLLCNWQKILAVSSLGVDLDEELRQLTRDAQEFDIWKQTYLRTCATIDQELQQHPRVDSFDSGTTALAIVRQGELVTVANVGDSRAVLATLNEDGNLIPVQLTVDFKPDLPQEAERIALSRGRVFCSHDEPGVYRVWQPNKGTPGLALSRALGDHCMKEFGLISEPEVTQRHITNRDQFAILATDGVWDVVSNEEAVQIVSSAPSREKSAKRLVKHAAHAWKYKRPGTAMDDISAICMYFHSSSPSNQSQTVFRA*

Click here to download the sequence:
Link to NCBI Protein BLAST