Transcript Information: S_Transcript_194385.p2


Annotated TAIR IDAT5G46860.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)VAM3, ATVAM3, SYP22, ATSYP22, SGR3
Annotation TypeHomolog
Chromosome Positionchr5:19012342-19013795 | Reverse length=268
E-Value1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93928239653578
Replicate 23.1147467610609
Replicate 31.7357869255153
Condition 2: 8 Hour
Replicate 12.7597563939819
Replicate 22.631982192909
Replicate 32.0061974216453
Condition 3: 24 Hour
Replicate 13.0839835516133
Replicate 21.5997984642128
Replicate 32.9672993417784


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194385.p2 GENE.S_Transcript_194385~~S_Transcript_194385.p2 ORF type:complete len:85 (+),score=16.80,Syntaxin_2|PF14523.2|4.7e-07 S_Transcript_194385:464-718(+)
ATGGTTAAACTACCATGTCATTTGAGCCACAAGACCAGGTTACACATTGGGCAATTAGTGAAGAACACATCGGCTACACTCAAGCAAGCAAGTGAATCTGATCATGGTACCAATGTCAGTGCCAGCAAGAAGATTTTTGATGCTAAGCTTGCCAAAGATTTCCTAAAGGCTCAACATCTAGCAGTTGAGAGGGAAACTGCATATACCCCTTTTGTTCTCCAGGCTATTCTTCATTCAAGGCTTTTTAGTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194385.p2 GENE.S_Transcript_194385~~S_Transcript_194385.p2 ORF type:complete len:85 (+),score=16.80,Syntaxin_2|PF14523.2|4.7e-07 S_Transcript_194385:464-718(+)
MVKLPCHLSHKTRLHIGQLVKNTSATLKQASESDHGTNVSASKKIFDAKLAKDFLKAQHLAVERETAYTPFVLQAILHSRLFSH*

Click here to download the sequence:
Link to NCBI Protein BLAST