Transcript Information: S_Transcript_19447.p1


Annotated TAIR IDAT2G04270.5
Annotated Gene NameRNAse E/G-like
Annotated Gene Symbol(s)RNEE/G
Annotation TypeOrtholog
Chromosome Positionchr2:1474961-1480014 | Forward length=1001
E-Value6.1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4927989087432
Replicate 21.1948899566933
Replicate 31.3198863348031
Condition 2: 8 Hour
Replicate 11.7324301611597
Replicate 21.9472595527809
Replicate 31.6079652932191
Condition 3: 24 Hour
Replicate 11.6056200631385
Replicate 21.6219749097192
Replicate 31.0244930996275


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19447.p1 GENE.S_Transcript_19447~~S_Transcript_19447.p1 ORF type:3prime_partial len:517 (+),score=135.15,RNase_E_G|PF10150.5|2e-85 S_Transcript_19447:1175-2722(+)
ATGTGCAATGTGATAGTGTTTACCTTGGGGTTGTTACAAAACTGGTTCCTCATATGGGTGGTGCATTTGTTAATATTGGGAGTTCTAGACCCTCTCTTATGGACATTAAGCATAATAGGGAACCGTTCATATTTCCCACCCTTTGGTAGCATTTCTAAGGAAAAGGATGTTAATGGTTCTCCTTCATTTGAGCTTGATAAGCATACCAACCAGAATGAACAAGTATTCTTAGATGAAGATGATAGACAGCTATTTGATGATGATGCTGAGGTTGATTTTGAAGATGATGATTTTGAGGACAATGAAACTGAAGATGACATGGATGTTGAAGAAGTTCAAATAAAGAATGTGATTGGCTCTGCAGTTGATGATACTGGAAATGGTGCAAATGTCGGAGGCTGTTCCAGTCAGTTGAATGGGGACGGTAACTGTGTAAAAGTTCAATCTTATTTACAAGGACATAAAAGAACCAAGCGCATTCATGTTGCTGAGCAGATGTGGGCTCAAGTCCGCAAAGGCACCAAGATAGTAGTACAAGTTGTAAAAGAGGGATTGGGTAGAAAAGGCCCCACATTAACTGCCTATCCAAAGCTTAGGAGCAGATTCTGGATATTGATCACTAGGTGCAGTAGTGTTGGAGTTTCAAAGAAAATATCTGGTGTTGAACGTACACGCTTGAGAGTGATAGCAAAATCATTGCAGCCTCCTGGTTTTGGCGTGACTGTTAGAACTGTTGCTGCCGGCCATTCTATTGAAGAACTGCAGAAGGACTTGGAGGGCCTGCTAGCAACCTGGACAAGCATTATGGAACATGCAAAATCTGCAGCACTGGCTGCAGATGAAGGTGTTGAAGGTGCTGTACCTGTTATCTTGCACCAGGCAATGGGTCAGACATTATCAATTGTTCAGGATTATTTTAGTGAGAAGGTCAAGAGGATGGTAGTTGACTCCCCGAGGACCTACCATGAGGTTACCAATTATCTGCAAGATATTGCTCCAGATCTTTGTGATAGAGTTGACCTGCATAGGAAAAAAGTTCCTTTATTTGATGAATTCAACATTGAAGAAGAGATCAACAATATCCTCAACAAAAGGGTTGCTCTTCCAAATGGAGGCTCTCTGGTGATTGAGCAAACTGAAGCATTGGTTTCTATCGATGTAAACGGAGGGCATGGAATGTTTGGTCAAGGGGCCTCACAAGAGAAAGCTATTCTTGATGTCAACCTTGCTGCTTCAAAGCAAATTGCCAGGGAGTTGCGGCTCAGGGATATTGGTGGCATTATTGTGGTAGATTTTATTGACATGATGGATGATTCAAACAAAAGATTAGTCTATGAAGAAGTCAAAAAGGCTGTTGAGAGGGATCGCTCCATGGTCAAGGTCTCTGAATTGTCAAAGCATGGGCTGATGGAGATTACTAGAAAGAGAGTTCGGCCAAGTGTGACATTTATGATTAGTGAACCATGCACCTGCTGTTATGGTACTGGGAGAGTTGAAGCTCTAGAGACTTCCTTCTCAAAAATTGAACATGAAATCTGCCGTTTGCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19447.p1 GENE.S_Transcript_19447~~S_Transcript_19447.p1 ORF type:3prime_partial len:517 (+),score=135.15,RNase_E_G|PF10150.5|2e-85 S_Transcript_19447:1175-2722(+)
MCNVIVFTLGLLQNWFLIWVVHLLILGVLDPLLWTLSIIGNRSYFPPFGSISKEKDVNGSPSFELDKHTNQNEQVFLDEDDRQLFDDDAEVDFEDDDFEDNETEDDMDVEEVQIKNVIGSAVDDTGNGANVGGCSSQLNGDGNCVKVQSYLQGHKRTKRIHVAEQMWAQVRKGTKIVVQVVKEGLGRKGPTLTAYPKLRSRFWILITRCSSVGVSKKISGVERTRLRVIAKSLQPPGFGVTVRTVAAGHSIEELQKDLEGLLATWTSIMEHAKSAALAADEGVEGAVPVILHQAMGQTLSIVQDYFSEKVKRMVVDSPRTYHEVTNYLQDIAPDLCDRVDLHRKKVPLFDEFNIEEEINNILNKRVALPNGGSLVIEQTEALVSIDVNGGHGMFGQGASQEKAILDVNLAASKQIARELRLRDIGGIIVVDFIDMMDDSNKRLVYEEVKKAVERDRSMVKVSELSKHGLMEITRKRVRPSVTFMISEPCTCCYGTGRVEALETSFSKIEHEICRLL

Click here to download the sequence:
Link to NCBI Protein BLAST