Transcript Information: S_Transcript_194474.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value6E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14155851720841
Replicate 20.1173552636038
Replicate 30.098099660019152
Condition 2: 8 Hour
Replicate 10.22686585443759
Replicate 20.11899919489216
Replicate 30.34014650433481
Condition 3: 24 Hour
Replicate 10.58098094389878
Replicate 20
Replicate 30.40247943199653


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194474.p1 GENE.S_Transcript_194474~~S_Transcript_194474.p1 ORF type:3prime_partial len:188 (+),score=32.42,SEO_N|PF14576.2|1.3e-37 S_Transcript_194474:58-618(+)
ATGCATAATGCCTTGACAATGATACAGAGCGGACAAGAGGATATGACGACTACAGGAACAACTATTGAGGGGCATAGAATGCTCGAAGAATTAGCTCCCATCATACAAAAGGTTTCAAATAAGATATCTTATCAATCTGACTTATTCTACGAGTTGGGAGAGAAGATGATGTCAGTTCTAAGAATGCTTTCCAACTACTCATGGGATGCAAAGGTGGTAATTACAATTGCAGCCTTTGCATTGGTGTATTCAGAGTTTGGTCTTTTAGTTCAGTTGAATCAGCAGCAGAAGCAGAAGAATAATAACCAAAATCCTTTTGTCATTTCGGTGGCTGCCCTGAAGCGAATTCCAGACTTAACCAAGCAGTGGGATGGAGAAAAGAAATTTCTACGCATTCTCAGCCGAGCCATTGACGGAATGTTGGATGTGACCATCAAGATTATTGAGGTTATGAAACTGCCTCCTAAGTACATCTCCACTGACCATCCACCTTTGTCTTCTCTTATGAAACAAGTGATTCCTAGTGCTGTTTATCACACTATCAAGGCTGCCACAAATTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194474.p1 GENE.S_Transcript_194474~~S_Transcript_194474.p1 ORF type:3prime_partial len:188 (+),score=32.42,SEO_N|PF14576.2|1.3e-37 S_Transcript_194474:58-618(+)
MHNALTMIQSGQEDMTTTGTTIEGHRMLEELAPIIQKVSNKISYQSDLFYELGEKMMSVLRMLSNYSWDAKVVITIAAFALVYSEFGLLVQLNQQQKQKNNNQNPFVISVAALKRIPDLTKQWDGEKKFLRILSRAIDGMLDVTIKIIEVMKLPPKYISTDHPPLSSLMKQVIPSAVYHTIKAATNY

Click here to download the sequence:
Link to NCBI Protein BLAST