Transcript Information: S_Transcript_194478.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.11043554541078
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194478.p1 GENE.S_Transcript_194478~~S_Transcript_194478.p1 ORF type:complete len:167 (+),score=26.38,SEO_N|PF14576.2|3.4e-25 S_Transcript_194478:77-577(+)
ATGGAAGACTTGGATATTGATGACATACTACTAAAAACCCATCAAACACCCACTATCGCCGACGTGGACGTCAGTCTGATTTTCAACTTCGTCAAGAATGTCCTCCAACATCCTTTAAATTGTGAAGAAGAGGATATAAATACCAGGGAGATCAGGGAAGCTGCTATCAAGGGGAATGAAATGCTGGAGAAATTAGCTCCTATCATATATAAGGTTTCGTCTAAGATATCTACAGACATTTCTCCGCCTAAGGACGACGCATATTGGAATATTTATGTTGAGAAATTAGAAGAGACAGCAATGTCAGTACTGAGAATGTTGTCCAACTACTCATGGGATGCAAAGGTGGTAATTACAATTGCAGCCTTTGCATTGGTGTATTCAGAGTTTGGTCTTTTAGTTCAGTTGAATCAGCAGCAGAAGCAGAAGAATAATAACCAAAATCCTTGTCATTTCGGTGGCTGTCCTGAAGCAAATTTCAGACTTAACCCACCCGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194478.p1 GENE.S_Transcript_194478~~S_Transcript_194478.p1 ORF type:complete len:167 (+),score=26.38,SEO_N|PF14576.2|3.4e-25 S_Transcript_194478:77-577(+)
MEDLDIDDILLKTHQTPTIADVDVSLIFNFVKNVLQHPLNCEEEDINTREIREAAIKGNEMLEKLAPIIYKVSSKISTDISPPKDDAYWNIYVEKLEETAMSVLRMLSNYSWDAKVVITIAAFALVYSEFGLLVQLNQQQKQKNNNQNPCHFGGCPEANFRLNPPV*

Click here to download the sequence:
Link to NCBI Protein BLAST