Transcript Information: S_Transcript_19448.p1


Annotated TAIR IDAT2G04270.5
Annotated Gene NameRNAse E/G-like
Annotated Gene Symbol(s)RNEE/G
Annotation TypeOrtholog
Chromosome Positionchr2:1474961-1480014 | Forward length=1001
E-Value1.4e-314
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.730400802045
Replicate 215.00362880152
Replicate 317.254766811056
Condition 2: 8 Hour
Replicate 118.488009979267
Replicate 219.867713522714
Replicate 319.29005427399
Condition 3: 24 Hour
Replicate 114.55556650746
Replicate 214.383263735359
Replicate 313.47661506757


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19448.p1 GENE.S_Transcript_19448~~S_Transcript_19448.p1 ORF type:complete len:947 (+),score=220.75,RNase_E_G|PF10150.5|1.3e+03,RNase_E_G|PF10150.5|7.8e-85,RNase_E_G|PF10150.5|3.6e+03 S_Transcript_19448:217-3057(+)
ATGACTCCTGATCATGCTACTTTGTGGAAAACCAAGGCCAAGATGCTTTGTCCAGTAAATTGCAATTACAATTACTCAATAAGAGGTCATAAATGGACCTGTTCTGATACAATCCCAAGGACAAAACCTGGATTTCTATCCAATCCTGTGTTTGATAAACAGCATGGAGTGACAATTGTAAGGTTATATAATAAGAAGCCTACAAAATATTTAAGGGGATCACAAGCACAGGAGCAGTACCTTCCAATTCAGCCTTCAATATCAGCTTTACCTAGAGATCAAGAAGACATTGAGGAATGCTTTGAGAGTGACTCCTTGCAATCAAAGCCCTTTCTAGATGATCTTATTGTTGAAAGTGGATACTATTTTGAAAGTAAAGATACAGTCTGTGTGGCTGATGAAGGATTGAACCTCAATCAAAGGTGCCTGCCTATTGAGGAGCCATGGCTGTTAGAGCCGTACTCCCCTTACACAGAAAAAGATCTGAATGCTTGCATTGATTTGATGGATGGAAATGACACTTTGAGGTTTCTTCCAAGTGATTCATCTGATAAGTTTAGATACAGCACCGATGATTTCATTCAAAGTGAGAAAATGTACTATCAAATTGACATCGACGCAAGTTCCAGCATGTCTTTCTCTGAGAGAAACCAACCAGTCGAGGATCCCTGGCTGCTTTATCCATCTCTTAAAGCTTCAGAAACTAACTGTAGATCAGCTACTGATGGTTCCATAATCAACGAGCCTACAGAAGATGAGCAAAACCTGCATGGTCTTCAGGAGCAGCGCCATCAAGTTTCAGAAAAACTGCTTTCTGGAAGAGAGAGTAATCTAGTTTCCCATGAGGATTCTGTTTCAACTGAGATATTAATCAACTGCTCAATCTGCACCATGCAAAGGATAGCTGTTTTAGAAGATGGGAATCTGGTTGAGCTGTTATTGGAACCAGTGAAGAGTAATGTGCAATGTGATAGTGTTTACCTTGGGGTTGTTACAAAACTGGTTCCTCATATGGGTGGTGCATTTGTTAATATTGGGAGTTCTAGACCCTCTCTTATGGACATTAAGCATAATAGGGAGCCGTTCATATTTCCACCCTTTGGTAGTATTTCTAAGGAGAAGGATGTTAATGGTTCTCCTTCATTTGAGCTTGATAAGCATACCAACCAGAATGAACAAGTATTCTTAGATGAAGTTGATGGCCCGCTATGTGATGATGATGCTGATGTTGATTTTGAAGATGATGATTTCGAGGACCATGAAACTGAAGACGACTTGGATGTTGAAATAGTTCAAATAAAGAATGTGATTGGCTCTGCAGTTGATGATACTGGAAATGGTGCAAATGTCGGAGGCTGTTCCAGTCAGTTGAATGGGGACGGTAACTGTGTAAAAGTTCAATCTTATTTACAAGGACATAAAAGAACCAAGCGCATTCATGTTGCTGAGCAGATGTGGGCTCAAGTCCGCAAAGGCACCAAGATAGTAGTACAAGTTGTAAAAGAGGGATTGGGTAGAAAAGGCCCCACATTAACTGCCTATCCAAAGCTTAGGAGCAGATTCTGGATATTGATCACTAGGTGCAGTAGTGTTGGAGTTTCAAAGAAAATATCTGGTGTTGAACGTACACGCTTGAGAGTGATAGCAAAATCATTGCAGCCTCCTGGTTTTGGCGTGACTGTTAGAACTGTTGCTGCCGGCCATTCTATTGAAGAACTGCAGAAGGACTTGGAGGGCCTGCTAGCAACCTGGACAAGCATTATGGAACATGCAAAATCTGCAGCACTGGCTGCAGATGAAGGTGTTGAAGGTGCTGTACCTGTTATCTTGCACCAGGCAATGGGTCAGACATTATCAATTGTTCAGGATTATTTTAGTGAGAAGGTCAAGAGGATGGTAGTTGACTCCCCGAGGACCTACCATGAGGTTACCAATTATCTGCAAGATATTGCTCCAGATCTTTGTGATAGAGTTGACCTGCATAGGAAAAAAGTTCCTTTATTTGATGAATTCAACATTGAAGAAGAGATCAACAATATCCTCAACAAAAGGGTTGCTCTTCCAAATGGAGGCTCTCTGGTGATTGAGCAAACTGAAGCATTGGTTTCTATCGATGTAAACGGAGGGCATGGAATGTTTGGTCAAGGGGCCTCACAAGAGAAAGCTATTCTTGATGTCAACCTTGCTGCTTCAAAGCAAATTGCCAGGGAGTTGCGGCTCAGGGATATTGGTGGCATTATTGTGGTAGATTTTATTGACATGATGGATGATTCAAACAAAAGATTAGTCTATGAAGAAGTCAAAAAGGCTGTTGAGAGGGATCGCTCCATGGTCAAGGTCTCTGAATTGTCAAAGCATGGGCTGATGGAGATTACTAGAAAGAGAGTTCGGCCAAGTGTGACATTTATGATTAGTGAACCATGCACCTGCTGTTATGGTACTGGGAGAGTTGAAGCTCTAGAGACTTCCTTCTCAAAAATTGAACATGAAATCTGCCGTTTGCTTGCAACCATGGACCGAAAGGCAGATCCTGTGAACCCCAAATCCTGGCCCAGACTGTTACTGAGAGTTGACAGTTATATGTGTGACTACCTGACCACAGGGAAAAAGACACGGCTTGCAACTTTGAGTAGTTCTCTTAAAGTTTGGATTCTTCTTAAGGTTGCCCGGAGTTTCACCAGGGGTGCCTTTGAAGTAAAGTTATTTGTAGATGAGAAAGCATATAATAAGCAGCACCAAGTTGATGTTGCTATGTTACAACAAGCGAAAGATGAAACATCAATATCCACCAAAAGAACTAAGTTGTTCCCTATTAAAAAGTGGAAGGCAGGAAGAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19448.p1 GENE.S_Transcript_19448~~S_Transcript_19448.p1 ORF type:complete len:947 (+),score=220.75,RNase_E_G|PF10150.5|1.3e+03,RNase_E_G|PF10150.5|7.8e-85,RNase_E_G|PF10150.5|3.6e+03 S_Transcript_19448:217-3057(+)
MTPDHATLWKTKAKMLCPVNCNYNYSIRGHKWTCSDTIPRTKPGFLSNPVFDKQHGVTIVRLYNKKPTKYLRGSQAQEQYLPIQPSISALPRDQEDIEECFESDSLQSKPFLDDLIVESGYYFESKDTVCVADEGLNLNQRCLPIEEPWLLEPYSPYTEKDLNACIDLMDGNDTLRFLPSDSSDKFRYSTDDFIQSEKMYYQIDIDASSSMSFSERNQPVEDPWLLYPSLKASETNCRSATDGSIINEPTEDEQNLHGLQEQRHQVSEKLLSGRESNLVSHEDSVSTEILINCSICTMQRIAVLEDGNLVELLLEPVKSNVQCDSVYLGVVTKLVPHMGGAFVNIGSSRPSLMDIKHNREPFIFPPFGSISKEKDVNGSPSFELDKHTNQNEQVFLDEVDGPLCDDDADVDFEDDDFEDHETEDDLDVEIVQIKNVIGSAVDDTGNGANVGGCSSQLNGDGNCVKVQSYLQGHKRTKRIHVAEQMWAQVRKGTKIVVQVVKEGLGRKGPTLTAYPKLRSRFWILITRCSSVGVSKKISGVERTRLRVIAKSLQPPGFGVTVRTVAAGHSIEELQKDLEGLLATWTSIMEHAKSAALAADEGVEGAVPVILHQAMGQTLSIVQDYFSEKVKRMVVDSPRTYHEVTNYLQDIAPDLCDRVDLHRKKVPLFDEFNIEEEINNILNKRVALPNGGSLVIEQTEALVSIDVNGGHGMFGQGASQEKAILDVNLAASKQIARELRLRDIGGIIVVDFIDMMDDSNKRLVYEEVKKAVERDRSMVKVSELSKHGLMEITRKRVRPSVTFMISEPCTCCYGTGRVEALETSFSKIEHEICRLLATMDRKADPVNPKSWPRLLLRVDSYMCDYLTTGKKTRLATLSSSLKVWILLKVARSFTRGAFEVKLFVDEKAYNKQHQVDVAMLQQAKDETSISTKRTKLFPIKKWKAGRK*

Click here to download the sequence:
Link to NCBI Protein BLAST