Transcript Information: S_Transcript_194489.p1


Annotated TAIR IDAT3G50360.1
Annotated Gene Namecentrin2
Annotated Gene Symbol(s)ATCEN2, CEN1, CEN2
Annotation TypeOrtholog
Chromosome Positionchr3:18674421-18675502 | Forward length=169
E-Value2.5E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1100.71507054272
Replicate 281.777645126357
Replicate 376.642268515083
Condition 2: 8 Hour
Replicate 1112.75640508999
Replicate 2109.98375888153
Replicate 398.6655700518
Condition 3: 24 Hour
Replicate 192.481033699701
Replicate 289.02670894661
Replicate 397.112422469998


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194489.p1 GENE.S_Transcript_194489~~S_Transcript_194489.p1 ORF type:complete len:167 (+),score=53.10,EF-hand_1|PF00036.28|1.6e-08,EF-hand_1|PF00036.28|8.9e-09,EF-hand_1|PF00036.28|4e-06,EF-hand_1|PF00036.28|2.6e-07,EF-hand_6|PF13405.2|1.1e-09,EF-hand_6|PF13405.2|0.0015,EF-hand_6|PF13405.2|8.1e-06,EF-hand_6|PF13405.2|0.0052,EF-hand_7|PF13499.2|7.8e-15,EF-hand_7|PF13499.2|5.2e-13,EF-hand_8|PF13833.2|0.0012,EF-hand_8|PF13833.2|6e-09,EF-hand_8|PF13833.2|0.72,EF-hand_8|PF13833.2|2.4e-10,EF-hand_5|PF13202.2|5.7e-06,EF-hand_5|PF13202.2|0.00097,EF-hand_5|PF13202.2|0.0002,EF-hand_5|PF13202.2|0.0095,EF-hand_9|PF14658.2|2.7e-06,EF-hand_9|PF14658.2|0.0068,EF-hand_4|PF12763.3|0.046,EF-hand_4|PF12763.3|0.046,EF-hand_4|PF12763.3|0.38,SPARC_Ca_bdg|PF10591.5|0.0069,SPARC_Ca_bdg|PF10591.5|0.013 S_Transcript_194489:245-745(+)
ATGTCAAGTGCTAGGTCAACAAGGAAAGACAAGCCACGAGGGCGCCATGGTCTAACTCAGCAAAAGAAACAAGAGATCAGGGAAGCTTTTGAGCTATTTGACACAGATGGCTCAGGAACCATTGATGCCAAGGAATTGAATGTTGCTATGAGGGCCCTTGGTTTTGAGATGACAGAAGAGCAAATCAACCAAATGATTGCAGATGTGGACAAAGATGGAAGTGGTGCCATTGATTTCGATGAGTTCTGCCACATGATGACTGCGAAAATTGGAGAAAGGGACACGAAGGAGGAGCTCATGAAAGCATTTCGTATAATTGACCAAGATAATAATGGAAAGATATCTCCACAAGATATTCAACGTATTGCCAAGGAATTGGGTGTAAACTTCACCGATAGGGAGATCCTGGAGATGGTTGAAGAAGCAGACCGAGATCATGATGGGGAGGTCAACGTGGAAGAGTTTCTGAGAATGATGAAGAGAACTTCGTATGCATACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194489.p1 GENE.S_Transcript_194489~~S_Transcript_194489.p1 ORF type:complete len:167 (+),score=53.10,EF-hand_1|PF00036.28|1.6e-08,EF-hand_1|PF00036.28|8.9e-09,EF-hand_1|PF00036.28|4e-06,EF-hand_1|PF00036.28|2.6e-07,EF-hand_6|PF13405.2|1.1e-09,EF-hand_6|PF13405.2|0.0015,EF-hand_6|PF13405.2|8.1e-06,EF-hand_6|PF13405.2|0.0052,EF-hand_7|PF13499.2|7.8e-15,EF-hand_7|PF13499.2|5.2e-13,EF-hand_8|PF13833.2|0.0012,EF-hand_8|PF13833.2|6e-09,EF-hand_8|PF13833.2|0.72,EF-hand_8|PF13833.2|2.4e-10,EF-hand_5|PF13202.2|5.7e-06,EF-hand_5|PF13202.2|0.00097,EF-hand_5|PF13202.2|0.0002,EF-hand_5|PF13202.2|0.0095,EF-hand_9|PF14658.2|2.7e-06,EF-hand_9|PF14658.2|0.0068,EF-hand_4|PF12763.3|0.046,EF-hand_4|PF12763.3|0.046,EF-hand_4|PF12763.3|0.38,SPARC_Ca_bdg|PF10591.5|0.0069,SPARC_Ca_bdg|PF10591.5|0.013 S_Transcript_194489:245-745(+)
MSSARSTRKDKPRGRHGLTQQKKQEIREAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPQDIQRIAKELGVNFTDREILEMVEEADRDHDGEVNVEEFLRMMKRTSYAY*

Click here to download the sequence:
Link to NCBI Protein BLAST