Transcript Information: S_Transcript_194538.p1


Annotated TAIR IDAT3G18520.2
Annotated Gene Namehistone deacetylase 15
Annotated Gene Symbol(s)HDA15, ATHDA15
Annotation TypeOrtholog
Chromosome Positionchr3:6361605-6365399 | Forward length=564
E-Value4.2E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.177501029317
Replicate 222.471359734506
Replicate 319.46733253269
Condition 2: 8 Hour
Replicate 123.036687070977
Replicate 219.471794186429
Replicate 319.736895930538
Condition 3: 24 Hour
Replicate 122.788798209324
Replicate 220.005710218628
Replicate 322.5752866589


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194538.p1 GENE.S_Transcript_194538~~S_Transcript_194538.p1 ORF type:3prime_partial len:162 (-),score=29.76,Hist_deacetyl|PF00850.15|7.8e-26 S_Transcript_194538:1-483(-)
ATGGGTGCTGAAGGTTACTGTGTGAATGTACCTTGGAGCCGTGGTGGAGTGGGTGACAATGATTACGTTTTTGCTTTTCAACATGTTGTCCTTCCAATAGCTCGTGAGTTCGCTCCTGATTTCACCATCATATCAGCTGGATTTGATGCAGCAAGAGGAGATCCACTTGGTGGTTGTGATGTGACACCTGCTGGTTATGCATACATGACTGACATGTTGAATACTGTTTCTGGCGGAAAGTTGCTTGTAATACTGGAGGGCGGCTATAACCTGCGGTCTATCTCATCTTCCGCCACAGCTGTAATCAAGGTATTGCTTGGAGAAAAGCCTGTAGACCAATTTAACAATGCTGGACCATCCAGAGCTGGCATGCAAACTGTTTTGGACGTGCTGAAAATTCAGACAAATTTTTGGCCAAGTCTTGCTTCCAACTTTACAAAACTGCAATCGTGTTGGGTATCATACTTGTCAGGGAGAAAAGTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194538.p1 GENE.S_Transcript_194538~~S_Transcript_194538.p1 ORF type:3prime_partial len:162 (-),score=29.76,Hist_deacetyl|PF00850.15|7.8e-26 S_Transcript_194538:1-483(-)
MGAEGYCVNVPWSRGGVGDNDYVFAFQHVVLPIAREFAPDFTIISAGFDAARGDPLGGCDVTPAGYAYMTDMLNTVSGGKLLVILEGGYNLRSISSSATAVIKVLLGEKPVDQFNNAGPSRAGMQTVLDVLKIQTNFWPSLASNFTKLQSCWVSYLSGRKV

Click here to download the sequence:
Link to NCBI Protein BLAST