Transcript Information: S_Transcript_194579.p2


Annotated TAIR IDAT1G32410.1
Annotated Gene NameVacuolar protein sorting 55 (VPS55) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11694398-11695297 | Forward length=140
E-Value7.4E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5051859617587
Replicate 212.50982913055
Replicate 310.26709019087
Condition 2: 8 Hour
Replicate 116.928402622879
Replicate 210.609330282757
Replicate 315.382570436584
Condition 3: 24 Hour
Replicate 19.2334043620037
Replicate 29.1122541389438
Replicate 312.481011664387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194579.p2 GENE.S_Transcript_194579~~S_Transcript_194579.p2 ORF type:complete len:97 (-),score=9.14,Vps55|PF04133.10|6.7e-22 S_Transcript_194579:97-387(-)
ATGTTAACAGTTATAATGTATGTCCTTCTCCCTATGCCTATGTTGTTTTTTGCCGGGTCTGACGCCTCTTCACTCTTTACTGAATCATCTGGTAACAGCTGGCTGGAAGCGGCTAAGTTCTTAACAGGAGCTTCAACAGTAGGCAGTATTGCCATTCCGGCTATCCTAAAACACGCTGGTATAATTGGCTGGGGGGCCCTAGCGATGGAGCTTTCTTCTTTCTTTGTTTTTGTTTTGGCCATTTTGTGCTTCATCAATATGAACGATGAGGATGGTTATAGTTTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194579.p2 GENE.S_Transcript_194579~~S_Transcript_194579.p2 ORF type:complete len:97 (-),score=9.14,Vps55|PF04133.10|6.7e-22 S_Transcript_194579:97-387(-)
MLTVIMYVLLPMPMLFFAGSDASSLFTESSGNSWLEAAKFLTGASTVGSIAIPAILKHAGIIGWGALAMELSSFFVFVLAILCFINMNDEDGYSFL*

Click here to download the sequence:
Link to NCBI Protein BLAST